Establishing a robust genetic sequencing and gene expression data library in cardiovascularly healthy cats

Vandewege, Michael 1 ; Kaplan, Joanna2; Stern, Joshua1; Rivas, Victor 1 ; Wouters, Jalena2; Harris, Samantha3

Research facility: University of California, Davis

Published May 13, 2025 on Dryad. https://doi.org/10.5061/dryad.02v6wwqff

Data files

May 13, 2025 version files 8.16 GB

heart_healthy_cat_sra.vcf.gz

8.16 GB
heart_healthy_cat_sra.vcf.gz.tbi

2.23 MB
README.md

674 B

Abstract

A population level VCF file compiled from 18 heart healthy domestic cats. Paired-end Illumina reads were mapped to the fca126 reference genome, and the VCF was generated using GATK4 best practices. Annotations were predicted using a locally installed version of VEP and used the fca126 gtf as a reference.

Establishing a robust genetic sequencing and gene expression data library in cardiovascularly healthy cats

Data files

Abstract

Description of the data and file structure

Data included

Files and variables

File: heart_healthy_cat_sra.vcf.gz.tbi

File: heart_healthy_cat_sra.vcf.gz

Establishing a robust genetic sequencing and gene expression data library in cardiovascularly healthy cats

Data files

Abstract

README: Establishing a robust genetic sequencing and gene expression data library in cardiovascularly healthy cats

Description of the data and file structure

Data included

Files and variables

File: heart_healthy_cat_sra.vcf.gz.tbi

File: heart_healthy_cat_sra.vcf.gz