Data from: The ectomycorrhizal fungus Paxillus ammoniavirescens influences the effects of salinity on loblolly pine in response to potassium availability
Data files
Feb 26, 2024 version files 91.32 KB
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README.md
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Rose_etal_2024_EnvMicro_Data.xlsx
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Abstract
Salinity is an increasing problem in coastal areas affected by saltwater intrusion, with deleterious effects on tree health and forest growth. Ectomycorrhizal (ECM) fungi may improve salinity tolerance of host trees, but the impact of external potassium (K+) availability on these effects is still unclear. Here, we performed several experiments with the ECM fungus Paxillus ammoniavirescens and loblolly pine (Pinus taeda L.) in axenic and symbiotic conditions at limited or sufficient K+ and increasing sodium (Na+) concentrations. Growth rate, biomass, nutrient content, and K+ transporter expression levels were recorded for the fungus, and the colonization rate, root development parameters, biomass, and shoot nutrient accumulation were determined for mycorrhizal and non-mycorrhizal plants. P. ammoniavirescens was tolerant to high salinity, although growth and nutrient concentrations varied with K+ availability and increasing Na+ exposure. While loblolly pine root growth and development decreased with increasing salinity, ECM colonization was unaffected by pine response to salinity. The mycorrhizal influence on loblolly pine salinity response was strongly dependent on external K+ availability. This study reveals that P. ammoniavirescens can reduce Na+ accumulation of salt-exposed loblolly pine, but this effect depends on external K+ availability.
https://doi.org/10.5061/dryad.0p2ngf27k
Dataset contains all biomass, nutrient concentrations, fungal and plant growth parameters, Ct, and colonization data obtained from the experiments described in the manuscript.
Description of the data and file structure
Dataset are presented in multiple spreadsheets that corresponds to the different experiments performed in the corresponding manuscript.
Missing values or not collected data are labeled n/a.
Below is a breakdown of each experiment and technical details.
fungalBiomass:
axenic experiment in liquid culture to determine biomass and nutrient concentrations.
- SampleID: sample identification number
- K_mM: potassium treatment
- Na_mM: sodium treatment
- biomass_g: fungal biomass
- K_mg/g: fungal potassium concentrations
- Na_mg/g: fungal sodium concentrations
- K:Na: calculation of potassium/sodium ratios
fungalqPCRCts:
Ct from qPCR on targeted genes from axenic experiment in liquid culture.
- SampleID: sample identification number
- K_mM: potassium treatment
- Na_mM: sodium treatment
- Ct-PaTub: Ct value for PaTub
- Ct-PaTrk: Ct value for PaTrk
- Ct-PaACU1: Ct value for PaACU1
- Ct-PaACU2: Ct value for PaACU2
fungalRadialGrowth:
axenic experiment on solid plate to determine radial growth.
Each value “10” represents 10 mm (i.e. the diameter of the original plug), meaning no growth was recorded.
- SampleID: sample identification number
- day: days after the experiment started
- K_mM: potassium treatment
- Na_mM: sodium treatment
- mm1: first diameter measurement
- mm2: second diameter measurement
- mm3: third diameter measurement
- mmAvg: average measurement from mm1, mm2 and mm3
- radAvg: average radius
- mm_day: growth per day in millimeter
coCulture4WkRoot:
co-culture experiment to determine the effect of salinity on ectomycorrhiza formation and root development (4 weeks).
- SampleID: sample identification number
- K_mM: potassium treatment
- Na_mM: sodium treatment
- root_dw: root dry weight (g)
- col_nm_sr: number of non-mycorrhizal short root
- col_m_sr : number of mycorrhizal short root
- col_sr_total: total number of short root
- col_p: percentage of colonization
- primary_rt_mm: primary root length in millimeter
- lat_rt_mm: average lateral root length in millimeter
- total_lateral_rts: total number of lateral roots
- total_rt_mm: total lateral root length in millimeter
coCulture8WkNaK:
co-culture experiment to determine the effect of symbiosis on plant salinity tolerance (8 weeks).
- Sample_ID: sample identification number
- Rep: replicate (same number means same plant)
- plantPart: plant tissue (shoot or root)
- K_mM: potassium treatment
- Na_mM: sodium treatment
- ECM: mycorrhizal status
- fw_g: fresh weight
- dw_g: dry weight
- col%: percentage of colonization
- K_mg_g: shoot potassium concentrations
- Na_mg_g: shoot sodium concentrations
- K:Na: calculation of potassium/sodium ratios
coCulture8WqPCRCts:
Ct from qPCR on targeted genes from co-culture experiment (8 weeks).
- SampleID: sample identification number
- K_mM: potassium treatment
- Na_mM: sodium treatment
- Ct-PaTub: Ct value for PaTub
- Ct-PaTrk: Ct value for PaTrk
- Ct-PaACU1: Ct value for PaACU1
- Ct-PaACU2: Ct value for PaACU2
- Rose, Benjamin D.; Dellinger, Marissa A.; Larmour, Clancy P. et al. (2024). The ectomycorrhizal fungus Paxillus ammoniavirescens influences the effects of salinity on loblolly pine in response to potassium availability. Environmental Microbiology. https://doi.org/10.1111/1462-2920.16597
