Data from: A forebrain hub for cautious actions via the midbrain
Data files
Feb 09, 2026 version files 119.27 MB
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Figure_1.ogwu
34.20 MB
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Figure_10.ogwu
1.18 MB
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Figure_11.ogwu
819.52 KB
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Figure_12.ogwu
2.01 MB
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Figure_2.ogwu
342.88 KB
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Figure_3.ogwu
248.41 KB
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Figure_4.ogwu
14.55 MB
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Figure_5.ogwu
5.12 MB
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Figure_6.ogwu
8.48 MB
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Figure_7.ogwu
14.85 MB
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Figure_8.ogwu
18.67 MB
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Figure_9.ogwu
18.80 MB
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README.md
18.42 KB
Abstract
Dataset DOI: 10.5061/dryad.0rxwdbsfp
Description of the data and file structure
The data correspond to the figures and panels shown in the published paper.
All files are .ogwu books from OriginLab. Find the free reader online here: https://www.originlab.com/viewer/
All the sheets inside each figure file (Figure_#.ogwu) are labeled according to the figure, plot, and label they correspond to in the paper.
The book sheets include defining metadata shown as parameter rows or indexed columns. These refer to information related to the plots shown in the paper. Each sheet contains traces (time series) or measured values. Any additional data or metadata in the sheets (but not listed below) are not included in the related paper.
Below we list each sheet name within a figure_#.ogwu. This is followed by defining details. The bold names are definitions of Parameter rows or Column names in the sheet, depending on the data. Each sheet name refers directly to the panel of the figure from which it comes.
Figure_1.ogwu
Figure 1B bottom - Source Data.ogwu
Figure 1B top - Source Data.ogwu
Figure 1C bottom Speed - Data Source.ogwu
Figure 1C top FF - Data Source.ogwu
Long Name: indicates speed type (Spd=Overall, Rot=Rotational, and Tra=Translational)
getFile: filename (includes subject (vgt1234), session (a,b,c…), and file number (1,2,3…))
Event: peak type (Cxp=All peaks, Cxp4=No peaks 3 sec prior, Cxp5=1 peak every>5 sec)
Figure_2.ogwu
Figure 2A Ang - Data Traces.ogwu
Figure 2A FF - Data Traces.ogwu
Figure 2A Rot - Data Traces.ogwu
Figure 2A Spd - Data Traces.ogwu
Figure 2B All turns- Data Source.ogwu
Figure 2B Noturns 3 sec prior - Data Source.ogwu
Figure 2B Turn per 5 sec - Data Source.ogwu
Units: 0, 4, and 5 indicate peak type, p=contraversive, n=ipsiversive,
File: filename
Area: measured area under the curve
Pk: measured peak value
xPk: time to Pk
Fig. 2A "-Data Traces" are representative traces of the "Data Source" measurements in 2B.
Figure_3.ogwu
Figure 3B bottom Speed - Data Traces.ogwu
Figure 3B top FF - Data Traces.ogwu
Figure 3C bottom left Angle - Data Traces.ogwu
Figure 3C bottom middle Angle - Data Traces.ogwu
Figure 3C bottom right Speed - Data Traces.ogwu
Figure 3C top left FF - Data Traces.ogwu
Figure 3C top middle FF - Data Traces.ogwu
Figure 3C top right FF - Data Traces.ogwu
Figure 3D left PCA - Data Source.ogwu
Figure 3D Right Peak bias - Data Source.ogwu
Class: cell class (1=Class B, 2=Class A, 5=Class C)
Cond1: cell class (Cl1=Class A, Cl2=Class B, Cl3=Class C)
Fig. 3B/C "-Data Traces" are representative traces of the "Data Source" measurements in 3D.
Figure_4.ogwu
Figure 4A Bottom FF cs1 - Data Source.ogwu
Figure 4A Bottom FF cs2 - Data Source.ogwu
Figure 4A Bottom FF cs3 - Data Source.ogwu
Figure 4A Bottom FF cs4 - Data Source.ogwu
Figure 4A Bottom FF cs5 - Data Source.ogwu
Figure 4A Bottom FF cs6 - Data Source.ogwu
Figure 4A Bottom FF cs7 - Data Source.ogwu
Figure 4A Bottom FF cs8 - Data Source.ogwu
Figure 4A Bottom FF cs9 - Data Source.ogwu
Figure 4A Bottom FF cs10 - Data Source.ogwu
Figure 4A Bottom Speed cs1 - Data Source.ogwu
Figure 4A Bottom Speed cs2 - Data Source.ogwu
Figure 4A Bottom Speed cs3 - Data Source.ogwu
Figure 4A Bottom Speed cs4 - Data Source.ogwu
Figure 4A Bottom Speed cs5 - Data Source.ogwu
Figure 4A Bottom Speed cs6 - Data Source.ogwu
Figure 4A Bottom Speed cs7 - Data Source.ogwu
Figure 4A Bottom Speed cs8 - Data Source.ogwu
Figure 4A Bottom Speed cs9 - Data Source.ogwu
Figure 4A Bottom Speed cs10 - Data Source.ogwu
Figure 4B bottom Translational - Data Source.ogwu
Figure 4B middle Overall Speed - Data Source.ogwu
Figure 4B middle Rotational - Data Source.ogwu
Figure 4B Top FF - Data Source.ogwu
CSif2CS: row code (=)
Low:
· 1 4 kHz
· 9 6 kHz
· 3 8 kHz
· 8 12 kHz
· 6 16 kHz
High:
· 2 4 kHz
· 10 6 kHz
· 4 8 kHz
· 7 12 kHz
· 5 16 kHz
Cond: indicates tone intensity and frequency
File: filename
Area: measured area under the curve
Figure_5.ogwu
Figure 5B - Data Source.ogwu
Figure 5C Bottom left Speed AA1 - Data Source.ogwu
Figure 5C Bottom left Speed AA2 - Data Source.ogwu
Figure 5C Bottom left Speed AA3-CS1 - Data Source.ogwu
Figure 5C Bottom left Speed AA3-CS2 - Data Source.ogwu
Figure 5C Bottom right Speed AA1 - Data Source.ogwu
Figure 5C Bottom right Speed AA2 - Data Source.ogwu
Figure 5C Bottom right Speed AA3-CS1 - Data Source.ogwu
Figure 5C Bottom right Speed AA3-CS2 - Data Source.ogwu
Figure 5C Top left FF AA1 - Data Source.ogwu
Figure 5C Top left FF AA2 - Data Source.ogwu
Figure 5C Top left FF AA3-CS1 - Data Source.ogwu
Figure 5C Top left FF AA3-CS2 - Data Source.ogwu
Figure 5C Top right FF AA1 - Data Source.ogwu
Figure 5C Top right FF AA2 - Data Source.ogwu
Figure 5C Top right FF AA3-CS1 - Data Source.ogwu
Figure 5C Top right FF AA3-CS2 - Data Source.ogwu
Figure 5D Bottom left Speed AA1 - Data Source.ogwu
Figure 5D Bottom left Speed AA2 - Data Source.ogwu
Figure 5D Bottom left Speed AA3-CS1 - Data Source.ogwu
Figure 5D Bottom right Speed AA1 - Data Source.ogwu
Figure 5D Bottom right Speed AA2 - Data Source.ogwu
Figure 5D Bottom right Speed AA3-CS1 - Data Source.ogwu
Figure 5D Bottom right Speed AA3-CS2 - Data Source.ogwu
Figure 5D Top left FF AA1 - Data Source.ogwu
Figure 5D Top left FF AA2 - Data Source.ogwu
Figure 5D Top left FF AA3-CS1 - Data Source.ogwu
Figure 5D Top right FF AA1 - Data Source.ogwu
Figure 5D Top right FF AA2 - Data Source.ogwu
Figure 5D Top right FF AA3-CS1 - Data Source.ogwu
Figure 5D Top right FF AA3-CS2 - Data Source.ogwu
Figure 5E Avoid - Data Source.ogwu
Figure 5E Baseline - Data Source.ogwu
Figure 5E From Action - Data Source.ogwu
Figure 5E Orient - Data Source.ogwu
B-D
File: filename
CS/CSif2CS: Trial type (1=CS1, 2=CS2, 3=CS3)
Code: Tasks (101=AA1, 112=AA2, 740=AA3, 9660=AA4)
Avoids%: percentage of avoids
Avoid Latency: latency of avoid responses
ITCs/trial: number of intertrial crossings per trial
E
Fac1: Task type
Fact2: Respond (act=avoids, noact=escape or miss)
Subj: Animal
Ses: Session
Figure_6.ogwu
Figure 6A Bottom left Speed CS1 - Data Source.ogwu
Figure 6A Bottom left Speed CS2 - Data Source.ogwu
Figure 6A Bottom left Speed CS3 - Data Source.ogwu
Figure 6A Bottom right Speed CS1 - Data Source.ogwu
Figure 6A Bottom right Speed CS2 - Data Source.ogwu
Figure 6A Bottom right Speed CS3 - Data Source.ogwu
Figure 6A Top left FF CS1 - Data Source.ogwu
Figure 6A Top left FF CS2 - Data Source.ogwu
Figure 6A Top left FF CS3 - Data Source.ogwu
Figure 6A Top right FF CS1 - Data Source.ogwu
Figure 6A Top right FF CS2 - Data Source.ogwu
Figure 6A Top right FF CS3 - Data Source.ogwu
Figure 6B Baseline - Data Source.ogwu
Figure 6B From Action - Data Source.ogwu
Figure 6B Orient - Data Source.ogwu
Figure 6C Bottom Speed Shock - Data Source.ogwu
Figure 6C Bottom Speed US - Data Source.ogwu
Figure 6C Bottom Speed WN - Data Source.ogwu
Figure 6C Top FF Shock - Data Source.ogwu
Figure 6C Top FF US - Data Source.ogwu
Figure 6C Top FF WN - Data Source.ogwu
Figure 6D Baseline - Data Source.ogwu
Figure 6D Escape - Data Source.ogwu
Code: Tasks, 156=unSignaled US
CSif2CS: Trial type for unSignaled US (1=US-shockWN, 2=Shock, 3=WN)
Otherwise, same as Fig5.
Figure_7.ogwu
Figure 7A xcorr Cl1 - Data Source.ogwu
Figure 7A xcorr cl2 - Data Source.ogwu
Figure 7A xcorr Cl3 - Data Source.ogwu
Figure 7A xcorr Cl4 - Data Source.ogwu
Figure 7B Bottom left Speed Cl1 - Data Source.ogwu
Figure 7B Bottom left Speed Cl2 - Data Source.ogwu
Figure 7B Bottom left Speed Cl3 - Data Source.ogwu
Figure 7B Bottom left Speed Cl4 - Data Source.ogwu
Figure 7B Top left FF Cl1 - Data Source.ogwu
Figure 7B Top left FF Cl2 - Data Source.ogwu
Figure 7B Top left FF Cl3 - Data Source.ogwu
Figure 7B Top left FF Cl4 - Data Source.ogwu
Figure 7B Top right FF Cl1 - Data Source.ogwu
Figure 7B Top right FF Cl2 - Data Source.ogwu
Figure 7B Top right FF Cl3 - Data Source.ogwu
Figure 7B Top right FF Cl4 - Data Source.ogwu
Figure 7C Bottom left Speed Cl1 - Data Source.ogwu
Figure 7C Bottom left Speed Cl2 - Data Source.ogwu
Figure 7C Bottom left Speed Cl3 - Data Source.ogwu
Figure 7C Bottom left Speed Cl4 - Data Source.ogwu
Figure 7C Bottom right Speed Cl1 - Data Source.ogwu
Figure 7C Bottom right Speed Cl2 - Data Source.ogwu
Figure 7C Bottom right Speed Cl3 - Data Source.ogwu
Figure 7C Bottom right Speed Cl4 - Data Source.ogwu
Figure 7C Top left FF Cl1 - Data Source.ogwu
Figure 7C Top left FF Cl2 - Data Source.ogwu
Figure 7C Top left FF Cl3 - Data Source.ogwu
Figure 7C Top left FF Cl4 - Data Source.ogwu
Figure 7C Top right FF Cl1 - Data Source.ogwu
Figure 7C Top right FF Cl2 - Data Source.ogwu
Figure 7C Top right FF Cl3 - Data Source.ogwu
Figure 7C Top right FF Cl4 - Data Source.ogwu
Figure 7D Avoid - Data Source.ogwu
Figure 7D Baseline - Data Source.ogwu
Figure 7D From Action - Data Source.ogwu
Figure 7D Orient - Data Source.ogwu
A-C
decX3: Neuron Classes (1=Class 4-red, 2=Class 2-green, 3=Class 3-cyan, 4=Class 1-black)
File: filename
D
Fac1: Task
Fac2: Trial response (cor=Active avoids, err=Escapes)
Fac4: Neuron class (cl1=class4, cl2= class2, cl3= class3, cl4= class1)
Subj: Animal
Area1: Baseline
Area2: Orient
Area3: Avoid/escape
e9Area4: Avoid/escape from Action
Figure_8.ogwu
Figure 8A Bottom Speed Mode1 - Data Source.ogwu
Figure 8A Bottom Speed Mode2 - Data Source.ogwu
Figure 8A Bottom Speed Mode3 - Data Source.ogwu
Figure 8A Top FF Mode1 - Data Source.ogwu
Figure 8A Top FF Mode2 - Data Source.ogwu
Figure 8A Top FF Mode3 - Data Source.ogwu
Figure 8B Bottom Speed Mode1 - Data Source.ogwu
Figure 8B Bottom Speed Mode2 - Data Source.ogwu
Figure 8B Bottom Speed Mode3 - Data Source.ogwu
Figure 8B Top FF Mode1 - Data Source.ogwu
Figure 8B Top FF Mode2 - Data Source.ogwu
Figure 8B Top FF Mode3 - Data Source.ogwu
Figure 8C Avoid - Data Source.ogwu
Figure 8C Baseline - Data Source.ogwu
Figure 8C From Action - Data Source.ogwu
Figure 8C Orient - Data Source.ogwu
Same as Fig. 7
Site3: Animal ID-session number-cell ID
Fac3: Avoid Mode ID (cl1=Mode2, cl2=Mode3, cl3=Mode1)
Figure_9.ogwu
Figure 9A Bottom left Speed type1a - Data Source.ogwu
Figure 9A Bottom left Speed Type1b - Data Source.ogwu
Figure 9A Bottom left Speed Type1c - Data Source.ogwu
Figure 9A Bottom middle Speed Type2a - Data Source.ogwu
Figure 9A Bottom middle Speed type2b - Data Source.ogwu
Figure 9A Bottom middle Speed Type2c - Data Source.ogwu
Figure 9A Bottom right Speed Type3a - Data Source.ogwu
Figure 9A Bottom right Speed Type3b - Data Source.ogwu
Figure 9A Bottom right Speed Type3c - Data Source.ogwu
Figure 9A Top left FF type1a - Data Source.ogwu
Figure 9A Top left FF Type1b - Data Source.ogwu
Figure 9A Top left FF Type1c - Data Source.ogwu
Figure 9A Top middle FF Type2a - Data Source.ogwu
Figure 9A Top middle FF type2b - Data Source.ogwu
Figure 9A Top middle FF Type2c - Data Source.ogwu
Figure 9A Top right FF Type3a - Data Source.ogwu
Figure 9A Top right FF Type3b - Data Source.ogwu
Figure 9A Top right FF Type3c - Data Source.ogwu
Figure 9B Bottom left Speed Type1a - Data Source.ogwu
Figure 9B Bottom left Speed Type1b - Data Source.ogwu
Figure 9B Bottom left Speed Type1c - Data Source.ogwu
Figure 9B Bottom middle Speed Type2a - Data Source.ogwu
Figure 9B Bottom middle Speed type2b - Data Source.ogwu
Figure 9B Bottom middle Speed Type2c - Data Source.ogwu
Figure 9B Bottom right Speed Type3a - Data Source.ogwu
Figure 9B Bottom right Speed Type3b - Data Source.ogwu
Figure 9B Bottom right Speed Type3c - Data Source.ogwu
Figure 9B Top left FF Type1a - Data Source.ogwu
Figure 9B Top left FF Type1b - Data Source.ogwu
Figure 9B Top left FF Type1c - Data Source.ogwu
Figure 9B Top middle FF Type2a - Data Source.ogwu
Figure 9B Top middle FF type2b - Data Source.ogwu
Figure 9B Top middle FF Type2c - Data Source.ogwu
Figure 9B Top right FF Type3a - Data Source.ogwu
Figure 9B Top right FF Type3b - Data Source.ogwu
Figure 9B Top right FF Type3c - Data Source.ogwu
Figure 9CD Avoid - Data Source.ogwu
Figure 9CD Baseline - Data Source.ogwu
Figure 9CD From Action - Data Source.ogwu
Figure 9CD Orient - Data Source.ogwu
Same as Fig. 8, but each Mode has 3 Types of Neurons
Fac3: Avoid Mode (cl1=Mode2, cl2=Mode3, cl3=Mode1)
Fac4: Neuron Type (a1=a, a2=b, a3=c)
Figure_10.ogwu
Figure 10A left AA1 - Data Source.ogwu
Figure 10A left AA2 - Data Source.ogwu
Figure 10A right AA3-CS1-CS2 - Data Source.ogwu
Figure 10B left Speed AA1-CS - Data Source.ogwu
Figure 10B left Speed AA1-CS-Light - Data Source.ogwu
Figure 10B left Speed AA2-CS - Data Source.ogwu
Figure 10B left Speed AA2-CS-Light - Data Source.ogwu
Figure 10B right Speed CS1 - Data Source.ogwu
Figure 10B right Speed CS1-Light - Data Source.ogwu
Figure 10B right Speed CS2 - Data Source.ogwu
Figure 10B right Speed CS2-Light - Data Source.ogwu
Figure 10C left AA1 AA2 - Data Source.ogwu
Figure 10C right AA3-CS1-CS2 - Data Source.ogwu
AB
Cond1a/11a: Trial/Light condition for AA1 and AA2 (CS1=CS+Light, CS2=CS, CS3=NoCS)
Cond32a: Trial/Light condition for AA3 (AA=CS1, PA=CS2, 74000-AA=CS1+Light, 74000-PA=CS2+Light, 400-LnoUS=NoCS+Light)
Ses: filename
Avoids%: percentage of avoids
ITCs/trial: number of intertrial crossings per trial
Latency: latency of responses
C
Cond3: Trial/Light condition For AA1 and AA2
Cond33s: Trial/Light condition for AA3 (CS1, CS2, CS1Lit, CS2Lit)
File: filename
Pk2: Orienting
Pk3: Avoid
Figure_11.ogwu
Figure 11A bottom cell counts - Data Source.ogwu
Figure 11B AA1 AA2 AA3-CS1-CS2 AAV lesion - Data Source.ogwu
Figure 11C left Speed AA1 - Data Source.ogwu
Figure 11C left Speed AA1-Lesion - Data Source.ogwu
Figure 11C left Speed AA2 - Data Source.ogwu
Figure 11C left Speed AA2-Lesion - Data Source.ogwu
Figure 11C right Speed AA1 - Data Source.ogwu
Figure 11C right Speed AA1-Lesion - Data Source.ogwu
Figure 11C right Speed AA2 - Data Source.ogwu
Figure 11C right Speed AA2-Lesion - Data Source.ogwu
Figure 11D Speed CS1-Control - Data Source.ogwu
Figure 11D Speed CS1-Lesion - Data Source.ogwu
Figure 11D Speed CS2-Control - Data Source.ogwu
Figure 11D Speed CS2-Lesion - Data Source.ogwu
Figure 11E Avoids from CS onset- Data Source.ogwu
Figure 11E Avoids from response- Data Source.ogwu
Figure 11E Orient from CS onset - Data Source.ogwu
Figure 11G AA1 AA2 AA3-CS1-CS2 electrolytic lesion - Data Source.ogwu
A
Animal: animal
Section: histology section number
Group: group (Lesion, Control)
Manual cell count: cell number within 0.02mm2 in STN
B-D
Code: Tasks (101=AA1, 112=AA2, 740=AA3)
Groupi: animal type (alSTN=Lesion, Control)
Animal: animal
Session: session
CS: Trial type (1=Active Avoids, 2=Passive Avoids)
Avoids%: percentage of avoids
Avoid Latency: latency of avoid responses
ITCs/trial: number of intertrial crossings per trial
E
Cond2/2av/12: Condition
Animal: animal
Session: session
Pk2: Orienting
Pk3: Avoid from CS onset
Pk4: Avoid from response
G
Cond13B: Tasks (bef=Control, aft=Lesion)
File: Filename
Avoids%: percentage of avoids
Avoid Latency: latency of avoid responses
ITCs/trial: number of intertrial crossings per trial
Figure_12.ogwu
Figure 12B left AA1 - Data Source.ogwu
Figure 12B left AA1-NoCS - Data Source.ogwu
Figure 12B middle AA2 - Data Source.ogwu
Figure 12B middle AA2-NoCS - Data Source.ogwu
Figure 12B right AA3 - Data Source.ogwu
Figure 12C left Speed AA1-CS - Data Source.ogwu
Figure 12C left Speed AA1-CS-Light - Data Source.ogwu
Figure 12C left Speed AA2-CS - Data Source.ogwu
Figure 12C left Speed AA2-CS-Light - Data Source.ogwu
Figure 12C right Speed CS1 - Data Source.ogwu
Figure 12C right Speed CS1-Light - Data Source.ogwu
Figure 12C right Speed CS2 - Data Source.ogwu
Figure 12C right Speed CS2-Light - Data Source.ogwu
Figure 12D left AA1 - Data Source.ogwu
Figure 12D left AA2 - Data Source.ogwu
Figure 12D right AA3 - Data Source.ogwu
A
Cond21A/22A: Trial/Light condition (Hi=CS+Light-Hi, Low=CS+Light-Lo, Zero=CS only)
Cond23A: Trial/Light condition (AA=CS1, PA=CS2, AAL=CS1+Light-Hi, PAL=CS2+Light-Hi)
Effect1: animal type (STN-PPT or NoOpsin)
Ses: session
Avoids%: percentage of avoids
Avoid Latency: latency of avoid responses
ITCs/trial: number of intertrial crossings per trial
C
Code1: Task (600=AA1, 9600=AA2, 74000=AA3)
CS: Trial/Light condition
D
Cond1tr2A/2tr2A: Light condition for AA1 and AA2 (Hi=CS+L, Zero=CS)
Cond3tr2A: Trial/Light condition for A3 (AA=CS1, PA=CS2, AAL=CS1+L, PAL=CS2+L)
File: filename
Pk2: Orienting
Pk3: Avoid
Code/software
All files are .ogwu books from Originlab. Find the free reader online here: https://www.originlab.com/viewer/
All files are labeled according to the figure, plot, and trace/column color they correspond to in the paper.
The books include defining metadata shown as parameter rows or indexed columns. These refer to information related to the plots shown in the paper. Each book contains traces (time series) or measured values as noted below. Any additional data or metadata in the books (not listed below) are not detailed/included in the related paper.
Access information
Other publicly accessible locations of the data:
- none
Data was derived from the following sources:
- none
