Fish occurrence data with geomorphic and climatic covariates
Data files
Oct 10, 2025 version files 24.52 KB
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prairie_bull_trout_occupancy_Nov2024.csv
22.89 KB
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README.md
1.63 KB
Abstract
Local species distributions are often geographically restricted to a subset of environmental conditions across a species’ full range, complicating forecasting climate warming effects. However, Bayesian species distribution models (SDM) can leverage geographically restricted datasets with broader knowledge of habitat relationships across the species’ range, to forecast climate vulnerability in data-limited regions. Principles of niche tracking and niche expansion were explored using an innovative Bayesian SDM approach to refine a climate vulnerability assessment for bull trout (Salvelinus confluentus), a cold-water riverine fish. The SDM was fit to a large, spatially dense fish occurrence and stream temperature dataset to model how climatic and geomorphic factors influence the current and future distribution of bull trout near its northern range extent. To assess niche tracking, wherein modelled relationships were based on observed occurrence patterns, we fitted the SDM with uninformative priors. For niche expansion, which assumes the population can adjust to occupy a warmer niche like southerly populations, we added an informative prior for summer stream water temperature occupancy. Models projected effects of warming on the distribution of suitable habitat using Representative Concentration Pathways 4.5 and 8.5 emissions scenarios for 2061-2080. Bull trout distribution was patchy and limited to intermediate thermal and slope conditions in streams with high groundwater contributions. The latter is a key determinant of biogeographic patterns not seen elsewhere across the species’ range. Under niche tracking, suitable habitat extent is projected to decline by 36-46%, while under niche expansion, suitable habitat could increase by 25-28%. The large dichotomy between projections illustrates the importance of considering local features and adaptive capacity when forecasting potential responses of cold-water fishes to climate warming. It also highlights a need for studies to better understand the mechanisms that may prevail as species distributions shift this century.
https://doi.org/10.5061/dryad.2rbnzs7zw
Description of the data and file structure
Stream surveys were conducted across the study area to document the occurrence of bull trout and related species. Each sampling site was visited multiple times to obtain temporal replicates. This dataset includes fish occurrence records along with associated geomorphic and climatic covariates. These data are used in species distribution models to predict the current and future distribution of bull trout in the region.
Files and variables
File: prairie_bull_trout_occupancy_Nov2024.csv
Description:
Variables
- site_id: Stream sampling location identity
- stream_id: Stream identity
- bulltrout_present: 0 = absent, 1 = present
- august_stream_temp: mean August stream temperature
- thermal_sensitivity: thermal sensitivity of streams
- contributing_area: stream contributing area in hectares
- elevation: stream elevation in meters
- gradient: stream gradient
- vegetation_cover: percent of vegetation cover at a site
- patch_id: habitat patch identity
Code/software
MS Excel can be used to view th file.
Access information
Other publicly accessible locations of the data:
- NA
Data was derived from the following sources:
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1:50 000 Canadian Digital Elevation Data, Natural Resources Canada; province polygons: Statistics Canada Catalogue No. 92-160-X;
State polygons: US Department of Commerce, US Census Bureau, Geography Division, Cartographic Products and Services Branch.
Field surveys were conducted across approximately 400 sites with temporal replicates (i.e., sites visited on two seperate occassions within a season). Presence-absence data across sampling sites was paired with geomorphic and climatic covariates derived through a GIS platform. Climatic variables were derived from Spatial Statistical Stream network models.
