Data from: Forest nitrogen dynamics in response to increasing nitrogen deposition: comparing above-canopy and soil fertilizations in a mature beech forest
Data files
Oct 02, 2025 version files 85.06 KB
-
dataset_Teglia_et_al._2025.xls
43.52 KB
-
Functional_genes_Teglia_et_al._2025.xls
38.40 KB
-
README.md
3.14 KB
Abstract
Nitrogen (N) fertilization experiments provide critical insights into how increasing N deposition alters the balance between N retention and saturation in forest ecosystems. However, most studies have considered soil N applications, overlooking tree canopy-atmosphere interactions, leading to an incomplete understanding of the fate of N in forests. We investigated ecosystem N dynamics four years after the establishment of a nitrogen manipulation experiment in a beech forest, involving Control (N0), 30 kg N ha^-1^ y^-1^, distributed to soil (N30) and above tree canopies (N30A), and 60 kg N ha^-1^ y^-1^ applied to the soil (N60). We assessed N concentration and δ15N across forest compartments (leaves, fine roots, ectomycorrhizal root tips, soil, and litter) and quantified microbial functional genes related to soil N processes. N concentrations were minimally affected by treatments, whereas δ15N increased along compartments, particularly in the N60, indicating enhanced soil N losses. Both N30 and N60 increased N concentrations and d15N values in ectomycorrhizal root tips and soil, suggesting enhanced fungal N immobilization but limited transfer to the host plants. In contrast, N30A led to 15N depletion in fine roots and litter, reflecting stronger plant reliance on ectomycorrhizal activity and potential alterations in litter quality, which may inhibit decomposition. Soil nitrifiers and denitrifiers were abundant, regardless of the treatments. Our findings highlight the need for future experiments to simulate realistic N deposition scenarios, including canopy interactions, to better understand ecosystem N dynamics and forest responses under global change.
Dataset DOI: 10.5061/dryad.3r2280gw1
Description of the data and file structure
This dataset contains measurements related to an experimental study simulating an increase in nitrogen deposition in forest ecosystems via nitrogen fertilization. It includes information on different nitrogen treatments, forest compartments considered, and measurements carried out.
- Nitrogen treatments were applied either through above-canopy or soil fertilizations, depending on the applied dose.
- Each treatment was replicated in three plots.
- Sampling included different forest compartments to assess responses in ecosystem nitrogen dynamics. Replicates were n=3 for all forest compartments, except for leaf litter and seeds (see Materials and Methods in Teglia et al. 2025 for more details).
Files and variables
File: dataset_Teglia_et_al._2025.xls
Description: This dataset includes nitrogen content (%) and δ¹⁵N (‰) measurements from tree and soil samples collected under four nitrogen fertilization treatments. Data are organized by treatment, plot, tree ID, and forest compartment.
Variables
- Forest compartments values:
- soil: soil core (5 cm diameter and 10 cm depth)
- leaves
- Litter_of: partially undecomposed litter – OF
- Litter_oh: decomposed litter – OH
- fineRoots: fine roots
- ERT: ectomycorrhizal root tips
- seeds
- Nitrogen content in the sample. Unit: %
- Stable nitrogen isotope composition (δ¹⁵N). Unit: ‰
File: Functional_genes_Teglia_et_al._2025.xls
Description: This dataset includes data from functional genes quantification in soil samples collected under four nitrogen fertilization treatments. Data are organized by treatment, plot, tree ID, and different functional genes quantified.
Functional genes quantified
- Genes encoding the ammonia monooxygenase subunit A of bacteria amoA AOB and archaea (amoA AOA), and the nitrite oxidoreductase subunit B of bacteria (nxrB), which catalyze the oxidation of ammonia to nitrite and nitrite to nitrate, respectively.
- Genes involved in denitrification, including those encoding nitrite reductases (bacterial nirS and bacterial and fungal nirK), nitric oxide reductase (bacterial qnorB), and nitrous oxide reductase (bacterial nosZ).
- Gene encoding dinitrogenase reductase involved in nitrogen fixation (bacterial nifH)
Units(please note that XX indicates a given functional gene):
- XX_dna: gene copies/ g dry soil used in DNA extraction = copies/g dry soil
- XX_ds: genes copies/ ng DNA extrated = copies / ng DNA extracted
- XX_norm : in this case number of gene copies was calculate as the ratio copies / g dry soil normalized for DNA extraction yield as well = copies / g dry normalized to extraction yield. These are the variables that were used in all the analyses presented in the manuscript by Teglia et al. 2025.
