Data from: First 87Sr/86Sr Isotope data for the extinct sloth Lestodon armatus: Insights into the spatial ecology of South American Late Pleistocene Megafauna
Data files
May 28, 2025 version files 104.77 MB
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AdV1.tif
1.17 MB
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Aigua.tif
1.15 MB
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Barreto.tif
1.16 MB
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Caño.tif
1.16 MB
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cum_currmap.tif
35.66 MB
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FossilData.cpg
5 B
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FossilData.csv
1.52 KB
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FossilData.dbf
2.30 KB
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FossilData.prj
145 B
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FossilData.qmd
715 B
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FossilData.shp
716 B
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FossilData.shx
276 B
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Lestodon_armatus.ini
443 B
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mask_UY.cpg
5 B
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mask_UY.dbf
188 B
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mask_UY.prj
159 B
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mask_UY.qmd
1.16 KB
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mask_UY.shp
3.55 KB
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mask_UY.shx
116 B
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mask_UY2.cpg
5 B
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mask_UY2.dbf
188 B
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mask_UY2.prj
159 B
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mask_UY2.qmd
1.16 KB
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mask_UY2.shp
7.82 KB
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mask_UY2.shx
116 B
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Mercedes.tif
1.17 MB
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README.md
3.94 KB
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README.txt
296 B
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Resist.tif
14.26 MB
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Script.R
1.75 KB
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SrCAL.tif
1.22 MB
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SrCALsd.tif
1.56 MB
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Suit.tif
40.96 MB
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UYData.cpg
5 B
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UYData.dbf
56.49 KB
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UYData.prj
145 B
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UYData.qmd
715 B
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UYData.shp
2.15 KB
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UYData.shx
844 B
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UYisoSr_se.tif
2.04 MB
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UYisoSr.tif
2.04 MB
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Yi.tif
1.14 MB
Abstract
This dataset provides comprehensive data for understanding the spatial ecology of the extinct giant ground sloth, Lestodon armatus, during the Late Pleistocene in Uruguay, South America. The research context focuses on elucidating mobility patterns and landscape use of this species through strontium isotope analysis. The dataset includes raw 87Sr/86Sr isotope values obtained from L. armatus bone and dentin samples collected from six distinct localities in Uruguay, including data from six individuals and serial sampling of one tooth from one of the sampled sites. Users can utilize these data to replicate the findings of Varela & Fariña (2025), which showed highly localized 87Sr/86Sr signatures, suggesting limited movement and defined home ranges for this species, and ruled out extensive seasonal migrations.
Included are all 87Sr/86Sr isotope data and the R script (script.R) used for statistical analysis, generation of figures, probability-of-origin surfaces, and home range estimations presented in the original study. Also, the dataset contains habitat suitability and resistivity raster files, as well as a .ini configuration file for executing the Omniscape analysis in Julia to explore landscape connectivity in southern Uruguay during the Last Glacial Maximum.
This dataset offers a valuable resource for researchers studying Quaternary paleoecology, megafauna mobility, isotope geochemistry, and landscape connectivity, providing a baseline for the spatial ecology of South American megamammals.
Dataset DOI: 10.5061/dryad.4qrfj6qpc
Description of the data and file structure
Varela & Fariña (2025)
Data and code to reproduce the analysis presented in Varela & Fariña (2025). First 87Sr/86Sr Isotope Data for the Extinct Sloth Lestodon armatus: Insights into the Spatial Ecology of South American Late Pleistocene Megafauna. Proceedings B. Doi: 10.1098/rspb.2025-0309
87Sr/86Sr Analysis:
DataFossil includes the 87Sr/86Sr Isotope Data generated in the present study.
UYData includes data for Uruguay from Avigliano et al. (2020)
UYisoSr includes the Sr isoscape from Bataille et al. (2020) cropped to the region of interest of the study
Rasters for intermediate results are also provided as .tif files.
Connectivity Analysis:
Suitability and Resistivity rasters for L. armatus are provided as .tif files
A .ini file is provided to execute the Omniscape analysis in Julia
Files and variables
Raw data and code
File: FossilData.csv
Description: Raw data generated in the study
Variables
- ID: Sample id
- ID2: Sample id2
- Site: Site name
- Sr: 87Sr/86Sr value
- Sd: 87Sr/86Sr Standard deviation
- Lat: Latitude
- Lon: Longitude
- Tooth position (cm): Sample position along L. armatus tooth
- Delta13Ccarb-coll: Delta13Ccarb-coll value for the sample
File: Script.R
Description: R script with the code to replicate analysis
GIS input files with data used for R analysis
File: FossilData.shp
Description: GIS shape file including L. armatus 87Sr/86Sr for analysis in R
File: UYData.shp
Description: GIS shape file with data from Avigliano et al. (2020)
File: mask_UY.shp
Description: GIS shape file, Uruguay mask
File: mask_UY2.shp
Description: GIS shape file, Uruguay mask
.tif files including input files, partial and final results
File: UYisoSr.tif
Description: Masked isoscape from Bataille et al. (2020)
File: UYisoSr_se.tif
Description: Masked isoscape from Bataille et al. (2020)
File: SrCAL.tif
Description: Calibrated isoscape based on data from Avigliano et al. (2020)
File: SrCALsd.tif
Description: Calibrated isoscape based on data from Avigliano et al. (2020)
File: AdV1.tif
Description: Probability of origin result for AdV site sample
File: Aigua.tif
Description: Probability of origin result for Aigua site sample
File: Barreto.tif
Description: Probability of origin result for Barreto site sample
File: Caño.tif
Description: Probability of origin result for Caño site sample
File: Mercedes.tif
Description: Probability of origin result for Mercedes site sample
File: Yi.tif
Description: Probability of origin result for Yi site sample
File: Suit.tif
Description: Suitability raster for L. armatus, input for Omniscape analysis
File: Resist.tif
Description: Resistivity raster for L. armatus, input for Omniscape analysis
File: cum_currmap.tif
Description: Omniscape analysis cumulative current result
.ini file to run Omniscape analysis
File: Lestodon_armatus.ini
Description: .ini file to run Omniscape analysis in Julia
Code/software
Data can be viewed in Qgis. R packages assignR and terra were used within R. Connectivity analysis was run in Omniscape package for Julia.
The script.R file contains all the code needed to replicate the Sr analysis.
The Lestodon_armatus.ini file has the code needed to replicate the Omniscape analysis.
Access information
Other publicly accessible locations of the data:
