Data for: Sunflower pollen diets reduce infection in closely related bumble bee species
Data files
Dec 10, 2025 version files 109.11 KB
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PyrobombusFinalS23ECM.R
53.34 KB
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PyrobombusS23_master_ECM.csv
14.99 KB
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PyrobombusS23_mastercons_ECM.csv
29.65 KB
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PyrobombusS23_masterevap_ECM.csv
7.08 KB
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README.md
4.04 KB
Abstract
Parasite growth and infection success are often influenced by host diet. Consuming sunflower pollen (Helianthus annuus) dramatically reduces infection by the trypanosomatid gut parasite Crithidia in the model bumble bee species Bombus impatiens, as well as two of its relatives in the subgenus Pyrobombus. However, only five Bombus species out of 265 species globally have been assessed, making results difficult to generalize. We examined how consuming sunflower pollen affects Crithidia infection in two previously untested species of bumble bees in the subgenus Pyrobombus, Bombus perplexus and Bombus ternarius, compared to wild-caught B. impatiens. Infected bees were fed either monofloral sunflower pollen, or monofloral buckwheat pollen (Fagopyrum esculentum) as a control for seven days, after which we counted the number of Crithidia cells in the gut and compared infection intensity between buckwheat and sunflower diets in these three species, while also examining how much of each diet they consumed, and the amount of sucrose solution they consumed. We found that sunflower pollen significantly reduced Crithidia infection in B. impatiens, with comparable significant effects in B. perplexus and B. ternarius. None of these effects were influenced by the quantity of pollen or sucrose consumed. These results demonstrate that, at least for its close relatives, B. impatiens is a good model species for understanding the effects of diet on host interactions with a common gut parasite.
Dataset DOI: 10.5061/dryad.59zw3r2p0
Description of the data and file structure
Collated data of exposing three bumble bees to Crithidia bombi and feeding sunflower or buckwheat pollen, and quantifying parasite.
File: PyrobombusS23_master_ECM.csv
Description: Infection intensity data for three bumble bee species. NA values indicate "not applicable".
Variables
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species: Bumble bee species epithet used.
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ID: Bee individual identification number.
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colony_ID: Name of the bumble bee colony the individual was pulled from.
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treatment: Pollen diet treatment of buckwheat (BW) or sunflower (SF).
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inoc_date: Date bee was inoculated with Crithidia bombi
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dissect_date: Date bees were dissected to count Crithidia bombi
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death_yn: Death record for bees. 1 = bee died, NA = bee lived
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deathdate: Date bees died.
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crit_count: Crithidia bombi count in 0.02ul of gut homogenate
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crit_source: The bumble bee colony the Crithidia bombi was sourced from.
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wings_cm: Wing measurements in cm taken in ImageJ as a proxy for body size.
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wing_mm: Wing measurements converted to mm used as a proxy for body size.
File: PyrobombusS23_mastercons_ECM.csv
Description: Consumption data for pollen and sucrose diets for three bumble bee species.
Variables
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species: Bumble bee species epithet used.
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ID: Bee individual identification number.
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colony_ID: Name of the bumble bee colony the individual was pulled from.
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treatment: Pollen diet treatment of buckwheat (BW) or sunflower (SF).
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pol_bef_date: Date initial pollen weight was taken
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pol_bef_time: Time initial pollen weight was taken
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pol_bef_weight_g: Initial pollen weight in grams
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pol_aft_date: Date final pollen weight was taken
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pol_aft_time: Time final pollen weight was taken
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pol_aft_weight_g: Final pollen weight
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suc_bef_date: Date initial sucrose weight was taken
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suc_bef_time: Time initial sucrose weight was taken
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bef_weight_g: Initial sucrose weight in grams
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suc_aft_date: Date final sucrose weight was taken
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suc_aft_time: Time final sucrose weight was taken
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suc_aft_weight_g: Final sucrose weight in grams
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Net_pollen: Total pollen consumed in grams
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Net_sucrose: Total sucrose consumed in grams
File: PyrobombusS23_masterevap_ECM.csv
Description: Evaporation data to account for how much liquid evaporated from diets to measure true consumption.
Variables
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ID: Pollen and sucrose control ID
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treatment: Pollen diet treatment of buckwheat (BW) or sunflower (SF).
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pol_bef_date: Date initial pollen weight was taken
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pol_bef_time: Time initial pollen weight was taken
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pol_bef_weight_g: Initial pollen weight in grams
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pol_aft_date: Date final pollen weight was taken
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pol_aft_time: Time final pollen weight was taken
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pol_aft_weight_g: Final pollen weight
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suc_bef_date: Date initial sucrose weight was taken
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suc_bef_time: Time initial sucrose weight was taken
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bef_weight_g: Initial sucrose weight in grams
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suc_aft_date: Date final sucrose weight was taken
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suc_aft_time: Time final sucrose weight was taken
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suc_aft_weight_g: Final sucrose weight in grams
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Net_pollen: Total pollen evaporated in grams
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Net_sucrose: Total sucrose evaporated in grams
File: PyrobombusFinalS23ECM.R
Description: R script for statistical analysis of this experiment.
Code/software
These data were analyzed in R version 4.2.3 “Shortstop Beagle” for Windows. The packages used were: lattice, psych, car, AER, MASS, corrplot, AICmodavg, dplyr, tidyr, lme4, mgcv, scatterplot3d, bbmle, emmeans, ggplot2, tidyverse, ggalt, multcomp, DHARMa, fitdistrplus, agricolae, glmmTMB, pscl, effectsize, and ggsignif. The script for all analyses is included with this code, PyrobombusS23FinalECM.R. It is annotated to explain my rationale throughout the analysis.
