Data and code from: Sea ice perturbation and mass starvation of Thick-billed Murres
Data files
Dec 22, 2025 version files 57.23 KB
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Murre_Stranding_Locations.csv
23.62 KB
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README.md
3.79 KB
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tbmu_necrospies_data.csv
14.65 KB
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tbmuhonours.Rproj
267 B
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tbmumap.Rmd
8.19 KB
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tbmustats.Rmd
6.71 KB
Abstract
During spring 2022, thousands of Thick-billed Murres (Uria lomvia) died on the southern Labrador and northeastern Newfoundland coasts. Location and timing of the event were compiled from public sources, including social media and institutions. Some retained carcasses were dissected and compared to healthy birds. The rapid-onset, five-week event lasted from March 18 to April 25, 2022, emanating from an impact site in southern Labrador. Extreme winds compacted and reduced sea ice area, which exposed sub-zero water temperatures and limited feeding options. Dissections were performed to determine body condition and demographics of birds affected. Neither sex nor age was associated with mortality, and a subset of carcasses tested negative for influenza A. Carcass masses averaged 65.5 % of the body mass of healthy birds, indicative of a threshold for stage III starvation (protein catabolism). Photographs and measurements showed significant pectoral muscle wasting, and pectoral mass was less than that of healthy birds. The probable cause of the die-off is starvation accelerated by a rapid drop in water temperature and limited foraging options driven by a sea-ice perturbation. Ocean-climatic variability and extreme events are expected to increase, posing challenges for polar seabirds.
Dataset DOI: 10.5061/dryad.9kd51c5x7
Description of the data and file structure
Sightings of stranded and deceased seabirds were compiled from social media, public reports, and counts and reviews from community organizations. Die-off carcasses were collected from multiple locations and frozen for further study. Both these birds and birds obtained from hunters were dissected. They were weighed, sexed, and external and internal measurements were taken.
Files and variables
File: tbmuhonours.Rproj
Description: Overarching project file to run code in R
File: tbmumap.Rmd
Description: Markdown file that organizes and tidies the compiled public reports of strandings and shows maps and graphs of where and when birds were found
File: tbmustats.Rmd
Description: Markdown file that organizes and analyzes results of bird necropsies to compare healthy birds to birds killed in the die-off
File: Murre_Stranding_Locations.csv
Description: Compiled public reports of strandings from the 2022-2023 mass mortality event
Variables
- Date: M/D/Y
- Species: Species of bird observed (if known)
- TBMU: Thick-billed Murre
- COMU: Common Murre
- NA: for unknown or unspecified species
- Place: Community Name
- Latitude: Degrees
- Longitude: Degrees
- Total: Total number of birds witnessed
- Live: Number of living birds
- Dead: Number of dead birds
- Observer: Name of person who reported the birds. Left blank if unknown
- Source: Name of place where report was received. ex. Personal Communication, Facebook, eBird.
- Other/Notes: Description of sighting
File: tbmu_necrospies_data.csv
Description: Compiled results from dissections
Variables
- Specimen: Number denoting order of dissection
- Identifier: Tag from collector describing when and where bird was recovered. Some birds had no tag/different tags. For birds shot by hunters, identifier is Source (Twillingate or Noah) Control and Number
- Location: Community where bird was found
- Date of Retrieval: Used for control only
- Date of Dissection: Day-Month (dissections completed between October 2023- February 2024
- Conrol or Wreck: (Misspelled Control in the column name) 'Starved' is from the wreck, 'control is hunter-obtained birds
- Partial or Intact: 'Partial' denotes a bird that was previously partially dissected. 'Intact' means the bird had not been touched since being picked up. 'Control' means hunter caught birds
- Sex Necropsy: Sex determined by visual observation of gonads upon dissection
- Sex Feather : Sex determined by feather testing at McGill lab
- Sex: Overall sex, since both methods were not used on all birds
- Plumage: Breeding. Because of time of year, all birds were in nonbreeding plumage
- Wing Length : Centimeters
- Mass: Grams
- Culmen: length of beak from the top, beginning at feathers to the tip. millimeters
- Sternum Length: length of keel bone in cm
- Supraorbital Ridge: Determination if an individual was juvenile or adult by the presence/absence of a brow ridge
- Lipid Index: Level of body fat
- Pectoral Mass: Mass removed left pectoral muscle
- Total Breast Weight: weight of both pectorals and breastbone together
- Notes: anything unusual about dissection
- Dissector: Name of dissector
- Keel: Projection of keel over pectoral muscles at its highest point using a ruler
- Keel Sternum Ratio: projection of keel divided by sternum length
Code/software
Rstudio running R version 4.2.3 (R Core Team, Dec 1 2023) using packages tidyverse (Wickham et al., 2019), doBy (Hojsgaard & Halekoh, 2023), viridis (Garnier et al., 2024), and patchwork (Pedersen, 2024).\
