Data from: Htr1b is necessary for normal retinal function in mice
Data files
Nov 24, 2025 version files 113.36 KB
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ERG_values_FINAL.xlsx
17.14 KB
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MEA_data.xlsx
63.01 KB
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OKR_analysis_FINAL.xlsx
14.04 KB
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README.md
3.28 KB
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Retinal_thickness_measurements_FINAL.xlsx
15.88 KB
Abstract
Introduction: Serotonin (5-HT) is a neurotransmitter that is involved in retinal development, physiology, and vision, yet the specific contribution of individual 5-HT receptors to retinal function is poorly characterized. We identified 5-HT receptor 1B (Htr1b) as a potential key regulator of serotonergic signaling in the retina.
Methods: Htr1b localization was examined using RNAseq and in situ labeling. Retinal structure was assessed using histology and SD-OCT. Visual function was evaluated using optomotor behavioral experiments. Retinal function was characterized in vivo using electroretinography (ERG) and ex vivo using multielectrode array (MEA) recordings.
Results: Htr1b transcript and HTR1B protein localized primarily to the inner retina and RGCs. While Htr1b-/- mice displayed normal retinal anatomy, they exhibited visual deficits in contrast sensitivity and visual acuity. ERG recordings revealed that RGCs had latency delays and reduced sensitivity to changes in light intensity. MEA analysis showed altered RGC firing patterns and increased variability following 5-HT application. These effects were cell-type specific: Htr1b-/- ON RGCs showed elevated basal firing rates while Htr1b-/- OFF RGCs showed reduced 5-HT responses.
Discussion: These findings demonstrate that Htr1b is necessary for normal retinal serotonergic signaling and contributes to the regulation of RGC excitability and visual sensitivity.
Dataset DOI: 10.5061/dryad.bk3j9kdps
Description of files
Retinal_thickness_measurements_FINAL.xlsx
Retinal Thickness Measurements
Sheet: ‘Retinal_thickness_measurements_FINAL’
Contains mean and individual retinal layer thickness values for each genotype.
Tab 1: ‘Histology’
Retinal layer thickness measurements obtained from histological sections.
Column Title - Meaning
GCL - Ganglion Cell Layer
IPL - Inner Plexiform Layer
INL - Inner Nuclear Layer
OPL - Outer Plexiform Layer
ONL - Outer Nuclear Layer
Units: µm
Tab 2: ‘SD-OCT’
Retinal thickness measurements obtained using SD-OCT imaging.
Column Title - Meaning
RNFL - Retinal Nerve Fiber Layer
GCL/IPL - -Combined Ganglion Cell + Inner Plexiform Layers
INL - Inner Nuclear Layer
OPL - Outer Plexiform Layer
ONL - Outer Nuclear Layer
ELM/IS/OS - External Limiting Membrane / Inner Segments / Outer Segments (combined region)
Units: mm
OKR_analysis_FINAL.xlsx
OKR Analysis
Sheet: ’OKR_analysis_FINAL’
Contains optomotor reflex (OKR) measurements.
Tab 1: ‘CS Threshold Photopic’
Contrast sensitivity thresholds under photopic conditions. Contrast sensitivity is reported as a dimensionless value.
Tab 2: ‘CS Threshold Scotopic’
Contrast sensitivity thresholds under scotopic conditions. Contrast sensitivity is reported as a dimensionless value.
Tab 3: ‘CS Function’
Contrast sensitivity measurements across 5 spatial frequencies.
Unit: cycles per degree (cyc/deg).
Tab 4: ‘Spatial Freq Threshold’
Spatial frequency threshold measurements.
Units: cyc/deg
ERG_values_FINAL.xlsx
Electroretinogram
Sheet: ‘ERG_values_FINAL’
Contains ERG amplitudes across a range of flash intensities.
Flash intensity units: photoisomerizations per rod (R*).
Tab 1: ‘pSTR Amplitude’
pSTR amplitudes from WT and Htr1b-/- retinas across multiple intensities.
Amplitude units: microvolts (µV)
Tab 2: ‘B-wave Amplitude’
B-wave amplitudes from WT and Htr1b-/- retinas across multiple intensities.
Amplitude units: microvolts (µV)
Tab 3: ‘ERG slope analysis pSTR’
Slope of pSTR amplitude plotted as a function of flash intensity.
Units: µV per R* (µV/R*)
Tab 4: ‘ERG slope analysis B wave’
Same analysis as Tab 3, using b-wave amplitudes.
MEA_data.xlsx
Multielectrode Array
Sheet: ‘MEA_data’
Contains multielectrode array spike rate and 5-HT response data.
Tab 1: Master table for organizing RGCs.
Unit - Electrode identifier
Retina - Retina identifier
Genotype - WT or Htr1b-/-
Response - Increase or decrease firing rate in response to 5-HT
ON-OFF - ON, OFF, or ON-OFF cell type
Tabs 2-9:
RGCs grouped by:
1. ON vs OFF classification
2. Increased vs decreased firing after 5-HT
3. Baseline (bath) vs 5-HT conditions
Each table lists spike rate (Hz) binned at 1-second intervals.
Note:Throughout all files, yellow-filled cells represent missing or excluded data.
Access information
Other publicly accessible locations of the data:
- None
Data was derived from the following sources:
- n/a
