Cooperation of kindlin-3 and talin-1 in integrin activation during neutrophil arrest and inflammation
Data files
Feb 25, 2026 version files 15.29 MB
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Data_deposit.zip
15.29 MB
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README.md
3.42 KB
Abstract
Neutrophil arrest requires the activation of beta2 integrins. Two FERM domain proteins, kindlin-3 and talin-1, are necessary for neutrophil arrest. In this project, we explored the molecular mechanisms of talin-1 and kindlin-3 cooperation during neutrophil adhesion. Flow chamber experiments showed that talin-1 and kindlin-3 are simultaneously recruited to the plasma membrane of HL-60 cells during the transition from rolling to arrest. Using primary neutrophils expressing fluorescent fusion proteins of talin-1 or kindlin-3, we confirmed that both proteins are recruited to the plasma membrane at the time of arrest, supporting their coordinated role in neutrophil integrin activation. In a mouse cremaster muscle ischemia-reperfusion model, beta2 integrin activation was detected in neutrophils attached to the endothelium after ischemia-reperfusion. These findings support that kindlin-3 and talin-1 work together to induce high-affinity integrin activation during inflammation.
Dataset DOI: 10.5061/dryad.fttdz096g
Description of the data and file structure
This dataset is associated with the American Heart Association (AHA) sponsored Career Development Award (942098) “Cooperation of kindlin-3 and talin-1 in integrin activation during neutrophil arrest and inflammation”. The Data_deposit.zip contains four experimental efforts, separated into subfolders:
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The monitoring of the two cytosolic proteins talin-1 and kindlin-3 during HL-60 cell adhesion.
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The monitoring of talin-1 during mouse neutrophil adhesion.
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The monitoring of kindlin-3 during mouse neutrophil adhesion.
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Confocal imaging of beta2 integrin activation in response to ischemia reperfusion injury (IRI).
The dataset includes zipped files, which contain multiple files that need to be uncompressed. The folders are:
Folder: HL-60.zip
File Description:
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3 - 1_XY1597092941_Z0_T000_C0: (fluorescence images of TagRFP-kindlin-3 in movie frames)
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3 - 1_XY1597092941_Z0_T000_C2: (fluorescence images of mEGFP-Talin-1 in movie frames)
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3 - 1_XY1597092941_Z0_T000_C3: (fluorescence images of Cell Membrane Deep Red in movie frames)
Folder: mouse_neutrophils_mEGFP-T1.zip
File Description:
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mEGFP-T1.tiff: shows the movie of mEGFP-talin-1 during neutrophil arrest from rolling on P-selectin and ICAM-1-coated coverslip.
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mEGFP-T1.xlsx: shows the analysis of talin-1 kinetics during neutrophil arrest. The integrated fluorescence intensity (A.U.), which is the product of mean fluorescence intensity and area, at different time points were analyzed. 0s is the time of arrest.
Folder: mouse_neutrophils_mScarlet-K3.zip
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mScarlet-K3.tiff: shows the movie of mScarlet-kindlin-3 during neutrophil arrest from rolling on P-selectin and ICAM-1-coated coverslip.
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mScarlet-K3.xlsx: shows the analysis of kindlin-3 kinetics during neutrophil arrest. The integrated fluorescence intensity (A.U.), which is the product of mean fluorescence intensity and area, at different time points were analyzed.
Folder: IRI.zip
File Description:
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20220621_IRI_ITGB2KI-0001 m24.tiff (fluorescence image of mAb24 antibody labelling before IRI)
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20220621_IRI_ITGB2KI-0002 Ly.tiff (fluorescence image of Ly6G antibody labelling before IRI)
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20220621_IRI_ITGB2KI-0003 BF.tiff (brightfield image of the cremaster tissue before IRI)
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20220621_IRI_ITGB2KI-0004 KIM.tiff (fluorescence image of KIM127 antibody labelling before IRI)
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C1-20220621_IRI_ITGB2KI.lif - Series007-2 m24.tiff (fluorescence image of mAb24 antibody labelling after IRI)
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C2-20220621_IRI_ITGB2KI.lif - Series007-2 Ly.tiff (fluorescence image of Ly6G antibody labelling after IRI)
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C3-20220621_IRI_ITGB2KI.lif - Series007-2 BF.tiff (brightfield image of the cremaster tissue after IRI)
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C4-20220621_IRI_ITGB2KI.lif - Series007-2 KIM.tiff (fluorescence image of KIM127 antibody labelling after IRI)
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mAb24_KIM127 in IRI.xlsx (Analysis of mAb24 and KIM127 labelling, mean fluorescence intensity, before and after IRI)
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Figure IRI.jpg (Description and Analysis of files 1-9)
Code/software
All .tiff files can be viewed by FIJI (ImageJ 1.54p). All .xlsx files can be viewed by Microsoft Excel. All versions appear to be compatible.
HL-60 cells were differentiated for 5-7 days in 1.3 % DMSO and flowed on P-selectin and ICAM-1 substrate in a microfluidic device. Mouse neutrophils were isolated by flushing mouse tibia or femur. Cells were perfused at 6 dyn/cm2 wall shear stress through a microfluidic flow chamber and examined by total internal reflection fluorescence microscopy. Confocal microscopy was utilized to examine the antibody labelling in the cremaster muscle microcirculation of a male mouse before and after cremaster ischemia and reperfusion.
