Data from: Nitrate inhibition of germination in Ericaceae relates to seed size and mycoheterotrophy
Data files
Nov 15, 2024 version files 27.10 KB
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klicivosti.txt
25.21 KB
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README.md
1.32 KB
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seed_dimensions.txt
575 B
Abstract
Nitrate is a well-known regulator of several processes in plants, including seed germination. It generally induces germination, but its effect is species-specific, and germination of some species is even inhibited. It is not clear what drives these differences. Nevertheless, it is striking that the germination of initially mycoheterotrophic orchids is generally inhibited by nitrate, indicating that this may be an adaptive trait allowing the seeds to detect sites with low nutrient availability, favourable for mycoheterotrophic plants. Whether this unusually negative response to nitrate is a general feature of mycoheterotrophic plant germination remains unknown. We focused on the family Ericaceae, which contains lineages that are either fully or initially mycoheterotrophic together with autotrophic ones, and we tested the germination response of selected species to nitrate. We found high variability in the germination responses even within members of this family. Fully and initially mycoheterotrophic species reacted more negatively to nitrate compared to autotrophic species. However, the species responses to nitrate also strongly correlated with seed dimensions. As a control, we also tested responses to another common nitrogen form, ammonium ion, but these showed little or no correlations with the tested predictors indicating that the observed germination responses are specific to nitrate. Two factors may be responsible for the negative response of mycoheterotrophic species of both Ericaceae and orchids to nitrate: seed size and the mode of carbon acquisition (mycoheterotrophy), nevertheless, both factors are closely linked. Thus, mycoheterotrophic plants in general, which nearly all produce tiny dust seeds, are likely to be negatively affected by nitrate.
https://doi.org/10.5061/dryad.gtht76hwv
Description of the data and file structure
The seeds were cultivated axenically in vitro on media with various concentration of nitrate or ammonium ion to count germination rate. We also measured dimensions of ripe seeds.
Files and variables
File: klicivosti.txt
Description:
Variables
- species: plant species tested
- ion: the ion tested - nitrate (NO3-) or ammonium (NH4+)
- concentration: the concentration of the tested ion in mg·l-1 of NO3- or NH4+ [mg·l-1].
- germination_rate: the proportion of germinated seeds counted after cultivation [%].
File: seed_dimensions.txt
Description:
Variables
- plant: plant species tested
- coat_length: total length of the seed [mm]
- coat_width: total width of the seed [mm]
- live_length: length of the living part (embryo plus endosperm, if present; excluding seed coat) [mm]
- live_width: width of the living part (embryo plus endosperm, if present; excluding seed coat) [mm]
Code/software
Both datasets are tab separated txt files ready to be open in any version of R software. They can also be open in Excel or other common software.
Seeds were cultivated axenically in vitro on media with various amount of nitrate or ammonium ion. We also measured dimensions of dry ripe seeds.
