Data and code from: Indigenous and European-American land-use legacies in forest composition, Fort Drum, northern New York State: What do species distribution models detect across a local extent?
Data files
Apr 15, 2026 version files 17.99 MB
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R1_Fort_Drum_ASCII_for_models_1800.zip
640.81 KB
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R1_Fort_Drum_ASCII_for_models_2000.zip
9.85 MB
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R1_Fort_Drum_CODE_for_models_1800.R
5.02 KB
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R1_Fort_Drum_CODE_for_models_2000.R
7 KB
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R1_Fort_Drum_DATA_for_models_1800.csv
48.92 KB
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R1_Fort_Drum_DATA_for_models_2000.csv
7.42 MB
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README.md
23.86 KB
Abstract
This study aimed to evaluate how past land use shapes forest compositional patterns using fine-resolution, local-extent species distribution models (SDMs), examining whether legacies of Indigenous and European-American land-use regimes interact to influence past and present forest composition and whether proxies of past land use improve SDMs. The study was conducted at Fort Drum, northern New York State, US (434 km²), focusing on 27 tree taxa across 18 genera, including Acer, Amelanchier, Betula, Carpinus, Carya, Fagus, Fraxinus, Juglans, Ostrya, Pinus, Populus, Prunus, Quercus, Salix, Thuja, Tilia, Tsuga, and Ulmus. Species distribution models were developed for tree taxa circa 2000 using a forest inventory of 10,043 plots, and analyses incorporated original land survey records circa 1800 alongside archaeological data. Results indicated that “distance to nearest circa 1950 forest” was the most important predictor of circa 2000 tree taxon distributions, surpassing soil conditions such as moisture and pH, and its inclusion increased SDM predictive performance (mean increase in AUC = 0.025). SDMs did not strongly indicate widespread Indigenous land-use legacies in taxon distributions but revealed some relationships between archaeological sensitivity and oak and pine distributions circa 1800 and 2000. Overall, measures of past land use or land cover improved the predictive power of fine-resolution SDMs, suggesting that interacting legacies of differing land-use regimes may influence current species distributions.
Dataset DOI: 10.5061/dryad.jsxksn0n9
Description of the data and file structure
Data and code for species distribution models
This research article sought to understand the relative influence of Native American and/or European-American land use upon tree species distributions observed circa 1800 and 2000.
Also, refer to the publication to understand abbreviations.
Files and variables
File: R1_Fort_Drum_DATA_for_models_1800.csv
Description: data for running species distribution models of tree species distributions circa 1800
Note: n/a = no data value
Note: Data for some variables are not provided because they would give away the locations of archaeological sites
Variables
- OID: object ID from GIS data layer
- GREAT_LOT: "Great Lot" lot number
- ALDER: surveyor-recorded presence (1) or absence (0) of alder
- ASH: surveyor-recorded presence (1) or absence (0) of ash
- BASSWOOD: surveyor-recorded presence (1) or absence (0) of basswood
- BEECH: surveyor-recorded presence (1) or absence (0) of beech
- BIRCH: surveyor-recorded presence (1) or absence (0) of
- BLKBIR: surveyor-recorded presence (1) or absence (0) of black birch
- BLKASH: surveyor-recorded presence (1) or absence (0) of black ash
- BUTTERNUT: surveyor-recorded presence (1) or absence (0) of butternut
- CEDAR: surveyor-recorded presence (1) or absence (0) of cedar
- CHERRY: surveyor-recorded presence (1) or absence (0) of cherry
- ELM: surveyor-recorded presence (1) or absence (0) of elm
- FIR: surveyor-recorded presence (1) or absence (0) of fir
- HEMLOCK: surveyor-recorded presence (1) or absence (0) of hemlock
- HICKORY: surveyor-recorded presence (1) or absence (0) of hickory
- HORNBEAM: surveyor-recorded presence (1) or absence (0) of hornbeam
- IRONWOOD: surveyor-recorded presence (1) or absence (0) of ironwood
- MAPLE: surveyor-recorded presence (1) or absence (0) of maple
- OAK: surveyor-recorded presence (1) or absence (0) of oak
- PINE: surveyor-recorded presence (1) or absence (0) of pine
- POPLAR: surveyor-recorded presence (1) or absence (0) of poplar
- PTCHPINE: surveyor-recorded presence (1) or absence (0) of pitch pine
- RCKMAPLE: surveyor-recorded presence (1) or absence (0) of rock maple
- SPRUCE: surveyor-recorded presence (1) or absence (0) of spruce
- TAMARACK: surveyor-recorded presence (1) or absence (0) of tamarack
- THORN: surveyor-recorded presence (1) or absence (0) of thorn
- WALNUT: surveyor-recorded presence (1) or absence (0) of walnut
- WHTMAPLE: surveyor-recorded presence (1) or absence (0) of white maple
- PRIMARY: the first tree taxon listed by the surveyor
- SP_CODE: the taxon code of the first-listed taxon
- SP_NAME: the taxon name of the first-listed taxon
- UNIQUE_TAXA: the number of unique taxa listed by the surveyor
- ACER_UNIQUE: the number of unique maple (Acer) taxa listed
- BETULA_UNIQUE: the number of unique birch (Betula) taxa listed
- FRAXINUS_UNIQUE: the number of unique ash (Fraxinus) taxa listed
- JUGLANS_UNIQUE: the number of unique walnut (Juglans) taxa listed
- PINUS_UNIQUE: the number of unique pine (Pinus) taxa listed
- ACER_ANY: surveyor-recorded presence (1) or absence (0) of any maple (Acer) taxon
- BETULA_ANY: surveyor-recorded presence (1) or absence (0) of any birch (Betula) taxon
- FRAXINUS_ANY: surveyor-recorded presence (1) or absence (0) of any ash (Fraxinus) taxon
- JUGLANS_ANY: surveyor-recorded presence (1) or absence (0) of any walnut (Juglans) taxon
- PINUS_ANY: surveyor-recorded presence (1) or absence (0) of any pine (Pinus) taxon
- UNIQUE_GENUS: the number of unique genus-level taxa
- PYRO_GENUS_PERCENT: the percent of unique genera that are pyrophilic
- SAND_MEAN: average soil percent sand in the lot (% by weight)
- POINT_X: longitude of the estimated center of the Great Lot
- POINT_Y: latitude of the estimated center of the Great Lot
- AWS100CM: average soil available water supply of the Great Lot (cm)
- BD: average soil bulk density of the Great Lot (g/cm)
- CLAY: average soil clay of the Great Lot (% by weight)
- CTI: average compound topographic index of the Great Lot (unitless)
- DEPTH: average soil depth of the Great Lot (cm)
- DRAINAGE: average soil drainage of the Great Lot (ranked; 1 = excessively drained, 7 = very poorly drained)
- KSAT: average soil permeability rate (saturated hydraulic conductivity) of the Great Lot (mm/hr)
- PH: average soil pH of the Great Lot (unitless)
- RADIATION0509: average growing-season solar radiation of the Great Lot (kWH/m2)
- SLOPE: average terrain slope angle of the Great Lot (degrees)
File: R1_Fort_Drum_DATA_for_models_2000.csv
Description: data for running species distribution models of tree species distributions circa 2000
Note: n/a = no data value
Note: Data for some variables are not provided because they would give away the locations of archaeological sites
Variables
- OID: object ID from GIS data layer
- TREE_CT: number of trees within the plot
- NED999_CT: number of trees without a taxon assigned within the plot
- MISSING_DBH_CT: number of trees missing diameter-at-breast-height within the plot
- BA_SUM: total basal area (m2)
- ABBA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACNE2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACPE_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACRU_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACSA2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACSA3_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ALNUS_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- AMELA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEAL2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEPA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEPO_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CACA18_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CACO15_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CADE12_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CAOV2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CEOC_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CRATA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FAGR_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRAM2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRNI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRPE_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- GLTR_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- JUCI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- JUVI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- LALA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- MALUS_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- OSVI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIAB_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIBA2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIGL_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIMA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIPU_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRE_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRU_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIST_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PISY_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POBA2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PODE3_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POGR4_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POTR5_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRAM_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRPE2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRSE2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRVI_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- QUAL_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- QURU_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- RHAMN_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- RHHI2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ROPS_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- SALIX_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- THOC2_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- TIAM_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- TSCA_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULAM_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULRU_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULTH_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- VIBUR_CT: number (count) of trees with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ABBA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACNE2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACPE_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACRU_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACSA2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ACSA3_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ALNUS_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- AMELA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEAL2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEPA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- BEPO_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CACA18_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CACO15_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CADE12_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CAOV2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CEOC_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- CRATA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FAGR_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRAM2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRNI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- FRPE_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- GLTR_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- JUCI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- JUVI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- LALA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- MALUS_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- OSVI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIAB_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIBA2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIGL_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIMA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIPU_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRE_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIRU_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PIST_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PISY_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POBA2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PODE3_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POGR4_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- POTR5_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRAM_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRPE2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRSE2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- PRVI_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- QUAL_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- QURU_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- RHAMN_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- RHHI2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ROPS_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- SALIX_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- THOC2_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- TIAM_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- TSCA_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULAM_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULRU_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- ULTH_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- VIBUR_BA: basal area (m2) with this PLANTS database species code (symbol) - see https://plants.usda.gov/
- AWC: soil available water capacity (cm/cm)
- AWS100cm: soil available water supply (cm)
- BD: soil bulk density (g/cm)
- CEC: soil cation exchange capacity (meq/100g soil)
- Clay: soil percent clay (% by weight)
- CTI: soil compound topographic index (unitless)
- Depth: soil depth (cm)
- Dist_to_forest_1950: distance to nearest forested area circa 1950 (m)
- Drainage: soil drainage (ranked; 1 = excessively drained, 7 = very poorly drained)
- Elevation: elevation (m)
- Ksat: soil permeability rate (saturated hydraulic conductivity) (mm/hr)
- OM: soil organic matter (% by weight)
- pH: soil pH (unitless)
- Radiation_05_09: growing-season solar radiation (kWH/m2)
- Sand: soil percent sand (% by weight)
- Slope: terrain slope angle (degrees)
- POINT_X: longitude of the plot
- POINT_Y: latitude of the plot
- Duplicate_in_30m_cell: whether there is >1 plot within a pre-defined 30 m x 30 m grid cell
File: R1_Fort_Drum_CODE_for_models_1800.R
Description: R file for running species distribution models of tree species distributions circa 1800
File: R1_Fort_Drum_CODE_for_models_2000.R
Description: R file for running species distribution models of tree species distributions circa 2000
File: R1_Fort_Drum_ASCII_for_models_1800.zip
Description: ASCII files as independent variables for training models of tree species distributions circa 1800
File: R1_Fort_Drum_ASCII_for_models_2000.zip
Description: ASCII files as independent variables for training models of tree species distributions circa 1800
Code/software
R version 4.x
R packages required are listed in the R files
Access information
Data was derived from the following sources:
