Data from: Influence of Myrmecophytic Acacia drepanolobium on the composition and growth of surrounding herbaceous vegetation
Data files
Aug 21, 2025 version files 67.43 KB
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dissimilarity_index.csv
1.95 KB
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grass_hieght_and_biomass.csv
3.31 KB
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Pin_hit_data.csv
60.25 KB
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README.md
1.91 KB
Abstract
Whistling thorn acacia (Acacia drepanolobium) forms monodominant stands in black cotton soils in East Africa arid highlands. The tree defends itself against large mammal herbivores with spinescence and symbiotic ants. While these defences have been extensively studied, little is known about the extent to which A. drepanolobium defence may benefit other plants growing in close association. We examined variation in herbaceous vegetation height, biomass, and composition between areas underneath A. drepanolobium canopies and the adjacent matrix in both fenced herbivore exclosures and unfenced areas. In unfenced areas, there was more tall herbaceous vegetation and biomass underneath tree canopies than away tree canopies, while these differences were not significant in fenced exclosures. Both height and biomass of understory vegetation were negatively correlated with A. drepanolobium canopy height. In the fenced herbivore exclosures, there was higher species diversity underneath trees than the surrounding matrix, but these differences were not apparent in the unfenced areas. The differences in herbaceous vegetation composition (Bray-Curtis dissimilarity index) between underneath tree and off tree locations were more pronounced in the unfenced areas than within the fenced herbivore exclosures. Our finding suggests that highly defended trees may moderate herbivore effects on herbaceous vegetation. To the extent that herbaceous vegetation underneath trees experiences protection from herbivory, such refugia microhabitats may serve as recolonization nucleus in attempts to restore chronically overgrazed systems.
Dataset DOI: 10.5061/dryad.k6djh9whb
Description of the data and file structure
This summary describes the dataset used for the paper tittled "Influence of Myrmecophytic Acacia drepanolobium on the composition and growth of surrounding herbaceous vegetation".
Files and variables
File: grass_hieght_and_biomass.csv
Description: Contains data on herbaceous vegetation height (table height) and biomass (dried weight from) clipped biomass at each sampling site
Variables
- location: Fenced, unfenced
- site: Open (away from tree canopies), short (underneath short trees), tall (underneath tall trees)
- hlbranch: height (cm) of the lowest tree branch
- grassheight: height (cm) of herbaceous vegetation
- grassdryweight : weight in grams of dried grass biomass clipped from each sampling point
File: dissimilarity_index.csv
Description: Bray-curtis dissimilality index among sampling sites
Variables
- site: a unique number describing each paired (within fenced and unfenced areas) sampling site
- HTREAT: Feanced; unfenced
- disIndex: Bray-curtis dissimilality index
File: Pin_hit_data.csv
Description: Data collected using-ten point pinframe to eatimate species composition and cover
Variables
- site: a unique descriptor combining information for each sampling site; e.g open-1-unfenced describes the first sampling site located in an open space (away from tree canopies) and is within the unfenced area
- The rest of the colums consists of pin hits for all the species (morphospecies) recorded. where a species could not be reliably identified, we assigned an arbitrary unique name
Code/software
R package was used for analysis and the code is provided in Zenodo
