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Now showing items 1-20 of 23
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Dryad Data Packages (23)
TreeBASE (1)
Dryad Data Files (0)
KNB (0)
Gatesy J, Milinkovitch MC, Waddell V, Stanhope MJ
(1999)
Data from: Stability of Cladistic Relationships between Cetacea and Higher-Level Artiodactyl Taxa.
Systematic Biology
http://dx.doi.org/10.5061/dryad.383
Waddell PJ, Hendy MD, Penny D, Hasegawa M
(1999)
Data from: Mammalian evolution: timing and implications from using the LogDeterminant transform for proteins of differing amino acid composition.
Systematic Biology
http://dx.doi.org/10.5061/dryad.389
Waddell PJ, Cao Y, Hauf J, Hasegawa M
(1999)
Data from: Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant.
Systematic Biology
http://dx.doi.org/10.5061/dryad.401
Singh TR, Tsagkogeorga G, Delsuc F, Blanquart S, Shenkar N, Loya L, Douzery EJP, Huchon D
(2009)
Data from: Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny.
BMC Genomics
http://dx.doi.org/10.5061/dryad.8326
Denoeud F, Henriet S, Mungpakdee S, Aury J, Da Silva C, Brinkmann H, Mikhaleva J, Olsen LC, Jubin C, Cañestro C, Bouquet J, Danks G, Poulain J, Campsteijn C, Adamski M, Cross I, Yadetie F, Muffato M, Louis A, Butcher S, Tsagkogeorga G, Konrad A, Singh S, Jensen MF, Huynh Cong E, Eikeseth-Otteraa H, Noel B, Anthouard V, Porcel BM, Kachouri-Lafond R, Nishino A, Ugolini M, Chourrout P, Nishida H, Aasland R, Huzurbazar S, Westhof E, Delsuc F, Lehrach H, Reinhardt R, Weissenbach J, Roy SW, Artiguenave F, Postlethwait JH, Manak JR, Thompson EM, Jaillon O, Du Pasquier L, Boudinot P, Liberles DA, Volff J, Philippe H, Lenhard B, Crollius HR, Wincker P, Chourrout D
(2010)
Data from: Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate.
Science
http://dx.doi.org/10.5061/dryad.8338
Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F
(2009)
Data from: A new malaria agent in African hominids.
PLoS Pathogens
http://dx.doi.org/10.5061/dryad.8515
Xiao J, Wang N, Murphy RW, Cook JM, Jia L, Huang D
(2012)
Data from: Wolbachia infection and dramatic intraspecific mitochondrial DNA divergence in a fig wasp.
Evolution
http://dx.doi.org/10.5061/dryad.475j7p93
San Mauro D, Gower DJ, Cotton JA, Zardoya R, Wilkinson M, Massingham T
(2012)
Data from: Experimental design in phylogenetics: testing predictions from expected information.
Systematic Biology
http://dx.doi.org/10.5061/dryad.83p1130j
Briscoe AG, Goodacre S, Masta SE, Taylor MI, Arnedo MA, Penney D, Kenny J, Creer S
(2013)
Data from: Can long-range PCR be used to amplify genetically divergent mitochondrial genomes for comparative phylogenetics? A case study within spiders (Arthropoda: Araneae).
PLoS ONE
http://dx.doi.org/10.5061/dryad.8dd3n
Irisarri I, San Mauro D, Abascal F, Ohler A, Vences M, Zardoya R
(2012)
Data from: The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates.
BMC Genomics
http://dx.doi.org/10.5061/dryad.3qd54
Rubinstein ND, Feldstein T, Shenkar N, Botero-Castro F, Griggio F, Mastrototaro F, Delsuc F, Douzery EJP, Gissi C, Huchon D
(2013)
Data from: Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes.
Genome Biology and Evolution
http://dx.doi.org/10.5061/dryad.ph920
Shedko SV, Miroshnichenko IL, Nemkova GA
(2013)
Data from: Complete mitochondrial genome of the poorly known Amur sculpin Mesocottus haitej (Cottoidei: Cottidae).
Mitochondrial DNA
http://dx.doi.org/10.5061/dryad.vv840
Lin G, Wang K, Deng X, Nevo E, Zhao F, Su J, Guo S, Zhang T, Zhao H
(2014)
Data from: Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia).
BMC Genomics
http://dx.doi.org/10.5061/dryad.gs135
Steiner CC, Charter SJ, Houck ML, Ryder OA
(2014)
Data from: Molecular phylogeny and chromosomal evolution of Alcelaphini (Antilopinae).
Journal of Heredity
http://dx.doi.org/10.5061/dryad.65t6n
Liu Y, Cox CJ, Wang W, Goffinet B
(2014)
Data from: Mitochondrial phylogenomics of early land plants: mitigating the effects of saturation, compositional heterogeneity, and codon-usage bias.
Systematic Biology
http://dx.doi.org/10.5061/dryad.7b470
Doyle JM, Katzner TE, Bloom PH, Ji Y, Wijayawardena BK, DeWoody JA
(2014)
Data from: The Genome sequence of a widespread apex predator, the golden eagle (Aquila chrysaetos).
PLoS ONE
http://dx.doi.org/10.5061/dryad.d0md6
Horn RL, Cowley DE
(2014)
Data from: Evolutionary relationships within the Triops (Notostraca: Branchiopoda) using complete mitochondrial genomes.
Journal of Crustacean Biology
http://dx.doi.org/10.5061/dryad.v7h47
Zou Y, Jing M-d, Bi X-x, Zhang T, Huang L
(2015)
Data from: The complete mitochondrial genome sequence of the Little Egret (Egretta garzetta).
Genetics and Molecular Biology
http://dx.doi.org/10.5061/dryad.3g604
Puckett EE, Etter PD, Johnson EA, Eggert LS
(2015)
Data from: Phylogeographic analyses of American black bears (Ursus americanus) suggest four glacial refugia and complex patterns of post-glacial admixture.
Molecular Biology and Evolution
http://dx.doi.org/10.5061/dryad.dc02b
Liu S, Wang X, Xie L, Tan M, Li Z, Su X, Zhang H, Misof B, Kjer KM, Tang M, Niehuis O, Jiang H, Zhou X
(2015)
Data from: Mitochondrial capture enriches mito-DNA 100 folds enabling PCR-free mitogenomics biodiversity analysis.
Molecular Ecology Resources
http://dx.doi.org/10.5061/dryad.19nf6
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Delsuc, Frédéric (3)
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Hasegawa, Masami (2)
Huchon, Dorothée (2)
San Mauro, Diego (2)
Shenkar, Noa (2)
Tsagkogeorga, Georgia (2)
Waddell, Peter J. (2)
Zardoya, Rafael (2)
Aasland, Rein (1)
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Subject
mitochondrial genome (12)
Mitochondrial genome (6)
Mitogenomics (4)
amino acid composition (3)
mitochondrial DNA genomes (3)
Mixture models (3)
phylogenomics (3)
Chordates (2)
Evolutionary rate (2)
invariant sites (2)
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2010 - 2017 (18)
2000 - 2009 (2)
1999 - 1999 (3)
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Systematic Biology (5)
BMC Genomics (3)
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PLoS ONE (2)
Evolutionary Applications (1)
Evolution (1)
Genetics and Molecular Biology (1)
Genome Biology and Evolution (1)
Journal of Avian Biology (1)
Journal of Crustacean Biology (1)
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