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Perl scripts for analysis

When using this data, please cite the original article:

Stevison LS, Noor MAF (2010) Genetic and evolutionary correlates of fine-scale recombination rate variation in Drosophila persimilis. Journal of Molecular Evolution 71(5-6): 332-345. doi:10.1007/s00239-010-9388-1

Additionally, please cite the Dryad data package:

Stevison LS and Noor MAF (2010) Data from: Genetic and evolutionary correlates of fine-scale recombination rate variation in Drosophila persimilis. Dryad Digital Repository. doi:10.5061/dryad.1877
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Dryad File Identifier doi:10.5061/dryad.1877/4    65 views   25 downloads  
Description Zipped set of scripts, sample input and sample output files of programs used to design SNPs to distinguish 2 lines of D. persimilis, and further to extract GC content, diversity, divergence, and motif abundance of a published genomic sequence for correlation to recombination rate variation.
Keywords genome evolution, molecular evolution,
Date Deposited 2010-08-20T14:58:22Z
Scientific Names Drosophila persimilis
Drosophila pseudoobscura
Drosophila miranda
Contained in Data Package Data from: Genetic and evolutionary correlates of fine-scale recombination rate variation in Drosophila persimilis.
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