Data from: Gastrointestinal microbiota of wild and inbred individuals of two house mouse subspecies assessed using high throughput parallel pyrosequencing

Kreisinger J

Date Published: September 4, 2014

DOI: http://dx.doi.org/10.5061/dryad.018g4

 

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Title PICRUST_CLUSTERS.tar
Downloaded 4 times
Description This includes clusters of quality filtered sequances that were used for construction of OTU table. Sequences were clustered using CLUSTOM (Hwang et al. 2013, DOI: 10.1371/journal.pone.0062623). Names of sequences correspond to sample IDs in enlisted Table S1.
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Title otu_table_DENOVO_CLUSTOM_R
Downloaded 13 times
Description This is the OTU table constructed based on CLUSTOM clustering of quality filtered sequences. Information on taxonomic assignation of individual OTUs is included. Please see the Table S1 for more details concerning individual samples.
Download otu_table_DENOVO_CLUSTOM_R.txt (275.4 Kb)
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Title mapping_vse
Downloaded 7 times
Description This file includes metadata for individual samples.
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When using this data, please cite the original publication:

Kreisinger J, Čížková D, Vohánka J, Piálek J (2014) Gastrointestinal microbiota of wild and inbred individuals of two house mouse subspecies assessed using high throughput parallel pyrosequencing. Molecular Ecology 23(20): 5048-5060. http://dx.doi.org/10.1111/mec.12909

Additionally, please cite the Dryad data package:

Kreisinger J (2014) Data from: Gastrointestinal microbiota of wild and inbred individuals of two house mouse subspecies assessed using high throughput parallel pyrosequencing. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.018g4
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