Data from: Genetic signatures of ecological diversity along an urbanization gradient

Kelly RP, O'Donnell JL, Lowell NC, Shelton AO, Samhouri JF, Hennessey SM, Feist BE, Williams GD

Date Published: September 13, 2016

DOI: http://dx.doi.org/10.5061/dryad.04tq4

 

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Title R data file
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Description R data file containing metadata, OTU table, and other R objects used for publication.
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Title R analysis script
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Description R script used for analyses resulting in the publication. Calls data from associated Rdata file.
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Title Banzai parameters
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Description Parameters for bioinformatics pipeline used for dataset.
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Title Banzai script
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Description Analytical script for bioinformatics (Banzai Pipeline, O'Donnell, available at: https://github.com/jimmyodonnell/banzai/) used in publication.
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Title metadata_PugetSound_eDNA
Downloaded 3 times
Description Metadata for DNA sequences accessioned in Genbank Bioproject 408172.
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Title BioSampleObjects
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Description Contains more specific Genbank accession information relevant to the project.
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When using this data, please cite the original publication:

Kelly RP, O'Donnell JL, Lowell NC, Shelton AO, Samhouri JF, Hennessey SM, Feist BE, Williams GD (2016) Genetic signatures of ecological diversity along an urbanization gradient. PeerJ 4: e2444. http://dx.doi.org/10.7717/peerj.2444

Additionally, please cite the Dryad data package:

Kelly RP, O'Donnell JL, Lowell NC, Shelton AO, Samhouri JF, Hennessey SM, Feist BE, Williams GD (2016) Data from: Genetic signatures of ecological diversity along an urbanization gradient. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.04tq4
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