Data from: Single nucleotide polymorphism discovery via genotyping by sequencing to assess population genetic structure and recurrent polyploidization in Andropogon gerardii

McAllister C, Miller AJ

Date Published: August 11, 2016

DOI: http://dx.doi.org/10.5061/dryad.05qs7

 

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Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title McAllister_Miller_Andropogon_gerardii_UNEAK_SNPs
Downloaded 12 times
Description Zipped VCF file containing SNPs called using UNEAK bioinformatic pipeline in 190 Andropogon gerardii accessions
Download McAllister.Miller.all.mergedUNEAKSNPs.vcf.gz (49.58 Mb)
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Title McAllister.Miller.all.mergedRefGuidedSNPs.vcf
Downloaded 11 times
Description Zipped VCF file containing SNPs called via alignment of GBS reads from 190 Andropogon gerardii accessions to the Sorghum bicolor genome.
Download McAllister.Miller.all.mergedRefGuidedSNPs.vcf.gz (87.97 Mb)
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Title McAllister_Miller_Locality_Ploidy_Info
Downloaded 6 times
Description This file includes locality and ploidy level inforomation for each specimen included in both SNP files in this dataset
Download McAllister_Miller_Locality_Ploidy_Info.csv (4.354 Kb)
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When using this data, please cite the original publication:

McAllister CA, Miller AJ (2016) Single nucleotide polymorphism discovery via genotyping by sequencing to assess population genetic structure and recurrent polyploidization in Andropogon gerardii. American Journal of Botany 103(7): 1314-1325. http://dx.doi.org/10.3732/ajb.1600146

Additionally, please cite the Dryad data package:

McAllister C, Miller AJ (2016) Data from: Single nucleotide polymorphism discovery via genotyping by sequencing to assess population genetic structure and recurrent polyploidization in Andropogon gerardii. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.05qs7
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