Data from: De novo and reference transcriptome assembly of transcripts expressed during flowering provide insight into seed setting in tetraploid red clover

Kovi MR, Amdahl H, Alsheikh M, Rognli OA

Date Published: March 13, 2017

DOI: http://dx.doi.org/10.5061/dryad.0bk52

 

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Title Tripo42_redclover_denovoassembly.Trinity
Downloaded 6 times
Description De novo assembly for genotype "Tripo" generated by Trinity program
Download Tripo42_redclover_denovoassembly.Trinity.fasta (63.34 Mb)
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Title Tripo55_redclover_denovoassembly.Trinity
Downloaded 5 times
Description De novo assembly for genotype "Tripo55" derived from Trinity program
Download Tripo55_redclover_denovoassembly.Trinity.fasta (61.72 Mb)
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Title Lork77_redclvoer_denovoassembly.Trinity
Downloaded 3 times
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Title Lork108_redclover_denovovassembly.Trinity
Downloaded 4 times
Description De novo assembly for genotype "Lork108" derived from Trinity program
Download Lork108_redclover_denovovassembly.Trinity.fasta (56.74 Mb)
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Title Tripo_redclover_GFF3
Downloaded 5 times
Description Annotation file (GFF3) for genotype Tripo generated by GFF3 python script (script can be found at the end)
Download Tripo_redclover_sorted.gff3 (31.08 Mb)
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Title Lork_redclover_GFF3
Downloaded 4 times
Description Annotation file (GFF3) for genotype "Lork" generated by GFF3 python script (script can be found at the end)
Download Lork_redclover_sorted.gff3 (29.73 Mb)
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Title Make_GFF3_Python script
Downloaded 7 times
Description Python script to generate Annotation files (GFF3) for genotypes Tripo (Tripo_redclover_sorted.gff3) and Lork (Lork_redclover_sorted.gff3).
Download Make_GFF3_KMR.py (39.39 Kb)
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When using this data, please cite the original publication:

Kovi MR, Amdahl H, Alsheikh M, Rognli OA (2017) De novo and reference transcriptome assembly of transcripts expressed during flowering provide insight into seed setting in tetraploid red clover. Scientific Reports 7: 44383. http://dx.doi.org/10.1038/srep44383

Additionally, please cite the Dryad data package:

Kovi MR, Amdahl H, Alsheikh M, Rognli OA (2017) Data from: De novo and reference transcriptome assembly of transcripts expressed during flowering provide insight into seed setting in tetraploid red clover. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.0bk52
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