Data from: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

Fischer MC, Rellstab C, Leuzinger M, Roumet M, Gugerli F, Shimizu KK, Holderegger R, Widmer A

Date Published: January 13, 2017

DOI: http://dx.doi.org/10.5061/dryad.11jp5

 

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Title SNP file PoPoolation2 format
Downloaded 26 times
Description Within the Aha_09_11_18_19_21_31_N1_N3_N4v3_rc file you can find the 2,178,204 SNPs as well as some small insertions and deletions in in the format of PoPoolation2 (Kofler et al. 2011).
Download Aha_09_11_18_19_21_31_N1_N3_N4v3_rc (332.5 Mb)
Download README.docx (100.7 Kb)
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When using this data, please cite the original publication:

Fischer MC, Rellstab C, Leuzinger M, Roumet M, Gugerli F, Shimizu KK, Holderegger R, Widmer A (2017) Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri. BMC Genomics 18(1): 69. http://dx.doi.org/10.1186/s12864-016-3459-7

Additionally, please cite the Dryad data package:

Fischer MC, Rellstab C, Leuzinger M, Roumet M, Gugerli F, Shimizu KK, Holderegger R, Widmer A (2017) Data from: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.11jp5
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