Data from: Phylogeography and evolution of a fungal-insect association on the Tibetan Plateau

Zhang Y, Zhang S, Li Y, Ma S, Wang C, Xiang M, Liu X, An Z, Xu J, Liu X

Date Published: September 24, 2014

DOI: http://dx.doi.org/10.5061/dryad.13272

 

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Title Fungus_Alignment_7loci_125individual_4326nt
Downloaded 12 times
Description Alignmnet file of 125 Ophiocordyceps sinensis individuals on seven nuclear loci: nrDNA ITS, MAT1-2-1, csp1, OSRC14, OSRC17, OSRC27, and OSRC32. See ReadMe file for dataset partition.
Download Fungus_Alignment_7loci_125individual_4326nt.fasta (563.7 Kb)
Download README.txt (129 bytes)
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Title Insect_Alignment_3loci_125individual_1404nt
Downloaded 18 times
Description Alignment of 125 ghost moth individuals on three loci:COI, cytb, and wg. See ReadMe file for dataset partition.
Download Insect_Alignment_3loci_125individual_1404nt.fasta (184.0 Kb)
Download README.txt (41 bytes)
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Title Fungus_MP_BestOutputTree
Downloaded 3 times
Description Best MP tree of Ophiocordyceps sinensis based on 6 loci (nrDNA ITS, MAT1-2-1, csp1, OSRC14, OSRC17, and OSRC27)
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Title Fungus_Bayes_OutputTree.con
Downloaded 5 times
Description BI tree of Ophiocordyceps sinensis based on 6 loci (nrDNA ITS, MAT1-2-1, csp1, OSRC14, OSRC17, and OSRC27)
Download Fungus_Bayes_OutputTree.con.tre (21.37 Kb)
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Title Fungus_Garli_OutputTree
Downloaded 6 times
Description ML tree of Ophiocordyceps sinensis based on 6 loci (nrDNA ITS, MAT1-2-1, csp1, OSRC14, OSRC17, and OSRC27)
Download Fungus_Garli_OutputTree.tre (20.42 Kb)
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Title Insect_MP_BestOutputTree
Downloaded 4 times
Description Best MP tree of ghost moths based on 2 loci (COI and wg)
Download Insect_MP_BestOutputTree.tre (3.443 Kb)
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Title Insect_Bayes_OutputTree.con
Downloaded 5 times
Description BI tree of ghost moths based on 2 loci (COI and wg)
Download Insect_Bayes_OutputTree.con.tre (33.35 Kb)
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Title Insect_Garli_OutputTree
Downloaded 6 times
Description ML tree of ghost moths based on 2 loci (COI and wg)
Download Insect_Garli_OutputTree.tre (27.10 Kb)
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Title raw data of infection trial
Downloaded 34 times
Download infection trial.xls (13.82 Kb)
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Title raw data of density survey
Downloaded 32 times
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When using this data, please cite the original publication:

Zhang Y, Zhang S, Li Y, Ma S, Wang C, Xiang M, Liu X, An Z, Xu J, Liu X (2014) Phylogeography and evolution of a fungal-insect association on the Tibetan Plateau. Molecular Ecology 23(21): 5337-5355. http://dx.doi.org/10.1111/mec.12940

Additionally, please cite the Dryad data package:

Zhang Y, Zhang S, Li Y, Ma S, Wang C, Xiang M, Liu X, An Z, Xu J, Liu X (2014) Data from: Phylogeography and evolution of a fungal-insect association on the Tibetan Plateau. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.13272
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