Data from: AFLP genome scan in the black rat (Rattus rattus) from Madagascar: detecting genetic markers undergoing plague-mediated selection

Tollenaere C, Duplantier J, Rahalison L, Ranjalahy M, Brouat C

Date Published: March 12, 2010

DOI: http://dx.doi.org/10.5061/dryad.1346

 

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Title AFLP dataset for population analyses
Description AFLP data matrix for the 239 Malagasy R. rattus individuals genotyped for 249 AFLP markers.The two first columns identify the individual (individual name and population) and the 249 following columns are AFLP data (marker names are indicated in the first line, 1: presence of the peak, 0: absence).
Download dataset_pop.txt (123.0 Kb)
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Title AFLP dataset for experimental plague challenge analyses
Description AFLP data matrix for the 249 AFLP markers in 103 Malagasy R. rattus plague-challenged individuals.The first columns identifies the individual (individual name), the second column refers to the experiment (low dose challenge or high dose challenge), the third column refers to the challenge issue (D: dying or S: surviving) and the 249 following columns are AFLP data (marker names are indicated in the first line, 1: presence of the peak, 0: absence).
Download dataset_infect.txt (54.57 Kb)
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When using this data, please cite the original publication:

Tollenaere C, Duplantier J-M, Rahalison L, Ranjalahy M, Brouat C (2010) AFLP genome scan in the black rat (Rattus rattus) from Madagascar: detecting genetic markers undergoing plague-mediated selection. Molecular Ecology 20(5): 1026-1038. http://dx.doi.org/10.1111/j.1365-294X.2010.04633.x

Additionally, please cite the Dryad data package:

Tollenaere C, Duplantier J, Rahalison L, Ranjalahy M, Brouat C (2010) Data from: AFLP genome scan in the black rat (Rattus rattus) from Madagascar: detecting genetic markers undergoing plague-mediated selection. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1346
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