Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)

Cranston KA, Hurwitz B, Sanderson MJ, Ware D, Wing RA, Stein L

Date Published: June 3, 2010

DOI: http://dx.doi.org/10.5061/dryad.1611

 

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Title AA chromosomes
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Description Concatenated sequences for each of the 12 chromosomes for the AA species
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Title ORYZA chromosomes
Downloaded 12 times
Description Concatenated sequences for 12 chromosomes across all 10 ORYZA species
Download oryzachromosomes.tar.gz (2.797 Mb)
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Title AA alignment and trees
Downloaded 30 times
Description Concatenated alignment for the AA genome species; include trees block corresponding to Figure 3A and 3B.
Download aa.nex (10.73 Mb)
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Title AA (gapless) alignment and trees
Downloaded 22 times
Description Sequences for AA species, all sites with missing data removed. Includes trees block corresponding to Figure 3C.
Download aagapless.nex (486.1 Kb)
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Title ORYZA alignment and trees
Downloaded 32 times
Description Concatenated sequences for all 10 ORYZA species. Includes trees block corresponding to Figure 2A, 2B and 2C.
Download oryza.nex (36.94 Mb)
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When using this data, please cite the original publication:

Cranston KA, Hurwitz B, Sanderson MJ, Ware D, Wing RA, Stein L (2010) Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae). Systematic Botany 35(3): 512-523. http://dx.doi.org/10.1600/036364410792495872

Additionally, please cite the Dryad data package:

Cranston KA, Hurwitz B, Sanderson MJ, Ware D, Wing RA, Stein L (2010) Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1611
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