Data from: Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea) based on multiple nuclear genes and implications for classification

Sharanowski BJ, Dowling APG, Sharkey MJ

Date Published: May 16, 2011

DOI: http://dx.doi.org/10.5061/dryad.1688p

 

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Title Plain Nexus file of all genes
Downloaded 126 times
Description Each gene or gene fragment is separated in its own block; protein-coding genes treated with Gblocks; rDNA aligned via secondary structure and with ambiguous regions excluded if the standard deviation of length in that region is > 1
Download allgenes_plain_sep2010.nex (755.4 Kb)
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Title allgenes_8_partitions_strategy_E
Downloaded 160 times
Description All genes with commands for MrBayes. This partitioning strategy was deemed the best using Bayes factors. The dataset has 8 partitions and is referred to as strategy E in the manuscript. Each gene or gene fragment is separated in its own block; protein-coding genes treated with Gblocks; rDNA aligned via secondary structure and with ambiguous regions excluded if the standard deviation of length in that region is > 1.
Download allgenes_eee_8part.nex (772.4 Kb)
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Title Statistics file from Bayes-strategyE
Downloaded 49 times
Description Statistics file from Bayes run for all genes. See also "allgenes_8_partitions_strategy_E" nexus file with associated commands for MrBayes.
Download allgenes_eee_8part.nex.stat (13.75 Kb)
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When using this data, please cite the original publication:

Sharanowski BJ, Dowling APG, Sharkey MJ (2011) Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea) based on multiple nuclear genes and implications for classification. Systematic Entomology 36(3): 549-572. http://dx.doi.org/10.1111/j.1365-3113.2011.00580.x

Additionally, please cite the Dryad data package:

Sharanowski BJ, Dowling APG, Sharkey MJ (2011) Data from: Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea) based on multiple nuclear genes and implications for classification. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1688p
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