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dc.contributor.author Sharanowski, Barbara J.
dc.contributor.author Dowling, Ashley P.G.
dc.contributor.author Sharkey, Michael J.
dc.date.accessioned 2011-05-16T16:39:48Z
dc.date.available 2011-05-16T16:39:48Z
dc.date.issued 2011-06-27
dc.identifier doi:10.5061/dryad.1688p
dc.identifier.citation Sharanowski BJ, Dowling APG, Sharkey MJ (2011) Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea) based on multiple nuclear genes and implications for classification. Systematic Entomology 36(3): 549-572.
dc.identifier.uri http://hdl.handle.net/10255/dryad.33714
dc.description This study examined subfamilial relationships within Braconidae, using 4kb of sequence data for 139 taxa. Genetic sampling included previously used markers for phylogenetic studies of Braconidae (28S and 18S rDNA) as well as new nuclear protein-coding genes (CAD and ACC). Maximum likelihood and Bayesian inference of the concatenated dataset recovered a robust phylogeny, particularly for early divergences within the family. This study focused primarily on non-cyclostome subfamilies, but the monophyly of the cyclostome complex was strongly supported. There was evidence supporting an independent clade, termed the aphidioid complex as sister to the cyclostome complex of subfamilies. Maxfischeria was removed from Helconinae and placed within its own subfamily within the aphidioid complex. Most relationships within the cyclostome complex were poorly supported, likely due to lower taxonomic sampling within this group. Similar to other studies, there was strong support for the alysioid subcomplex containing Gnamptodontinae, Alysiinae, Opiinae, and Exothecinae. Cenocoeliinae was recovered as sister to all other subfamilies within the euphoroid complex. Planitorus and Mannokeraia, previously placed in Betylobraconinae and Masoninae, respectively, were moved to the Euphorinae and may share a close affiliation with Neoneurinae. Neoneurinae and Ecnomiinae were placed as tribes within Euphorinae. A sister relationship between the microgastroid and sigalphoid complexes was also recovered. Within the helconoid complex was a well-supported lineage parasitic on lepidopteran larvae (macrocentroid subcomplex). Helconini was raised to subfamily status and was recovered as sister to the macrocentroid subcomplex. Blacinae was demoted to tribal status and placed within the newly circumscribed subfamily Brachistinae, which also contains the tribes Diospilini, Brulleiini, and Brachistini, all formerly in Helconinae. en
dc.relation.ispartofseries In Press;;2011
dc.relation.haspart doi:10.5061/dryad.1688p/1
dc.relation.haspart doi:10.5061/dryad.1688p/2
dc.relation.haspart doi:10.5061/dryad.1688p/3
dc.relation.isreferencedby doi:10.1111/j.1365-3113.2011.00580.x
dc.subject Phylogeny en
dc.subject Classification en
dc.title Data from: Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea) based on multiple nuclear genes and implications for classification en
dc.type Article *
dwc.ScientificName Braconidae en
dc.contributor.correspondingAuthor Sharanowski, Barbara J. en
prism.publicationName Systematic Entomology en
dryad.dansTransferDate 2017-08-30T23:38:20.274-0400
dryad.dansEditIRI https://act.easy.dans.knaw.nl/sword2/container/b9f970d6-fdc2-4676-aecd-11556afb4c5a

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Title Plain Nexus file of all genes
Downloaded 141 times
Description Each gene or gene fragment is separated in its own block; protein-coding genes treated with Gblocks; rDNA aligned via secondary structure and with ambiguous regions excluded if the standard deviation of length in that region is > 1
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Title allgenes_8_partitions_strategy_E
Downloaded 164 times
Description All genes with commands for MrBayes. This partitioning strategy was deemed the best using Bayes factors. The dataset has 8 partitions and is referred to as strategy E in the manuscript. Each gene or gene fragment is separated in its own block; protein-coding genes treated with Gblocks; rDNA aligned via secondary structure and with ambiguous regions excluded if the standard deviation of length in that region is > 1.
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Title Statistics file from Bayes-strategyE
Downloaded 53 times
Description Statistics file from Bayes run for all genes. See also "allgenes_8_partitions_strategy_E" nexus file with associated commands for MrBayes.
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