Data from: A universal mechanism generating clusters of differentiated loci during divergence-with-migration

Rafajlović M, Emanuelsson A, Johannesson K, Butlin RK, Mehlig B

Date Published: July 11, 2016

DOI: http://dx.doi.org/10.5061/dryad.170k4

 

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Title ReadMeFirst
Description Instructions and explanations for all files uploaded in connection to this publication.
Download ReadMeFirst.txt (7.62 Kb)
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Title Divergence_With_Migration
Description Simulation of multilocus model of divergence-with-migration.
Download Divergence_With_Migration.m (5.192 Kb)
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Title EstablishmentModel_DifferentiatedLocus
Description Simulation of two-locus establishment model. The code estimates the establishment probability at the differentiated locus.
Download EstablishmentModel_DifferentiatedLocus.m (12.56 Kb)
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Title EstablishmentModel_UndifferentiatedLocus
Description Simulation of the two-locus establishment model. The code estimates the establishment probability at an undifferentiated locus.
Download EstablishmentModel_UndifferentiatedLocus.m (15.66 Kb)
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Title GainModel_MoreStronglyDifferentiatedLocus
Description Simulation of the two-locus gain model. The code estimates the establishment probability at the more strongly differentiated locus.
Download GainModel_MoreStronglyDifferentiatedLocus.m (11.94 Kb)
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Title GainModel_WeaklyDifferentiatedLocus
Description Simulation of the two-locus gain model. The code estimates the establishment probability at the weakly differentiated locus.
Download GainModel_WeaklyDifferentiatedLocus.m (12.62 Kb)
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Title Data_Fig2A_3_gain
Description Data used to generate Fig. 2A (circles), and Fig. 3. For further details, please refer to ReadMeFirst file (available separately).
Download Data_Fig2A_3_gain.txt (2.236 Kb)
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Title Data_Fig2A_LargeLocus_gain
Description Data used to generate Fig. 2A (squares). For further details, please refer to ReadMeFirst file (available separately).
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Title Data_Fig2B_Fig4AB_gain
Description Data used to generate Fig. 2B (circles), and Fig. 4. For further details, please refer to ReadMeFirst file (available separately).
Download Data_Fig2B_Fig4AB_gain.txt (3.12 Kb)
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Title Data_Fig2B_LargeLocus_gain
Description Data used to generate Fig. 2B (squares). For further details, please refer to ReadMeFirst file (available separately).
Download Data_Fig2B_LargeLocus_gain.txt (450 bytes)
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Title Data_Fig2C_3_loss
Description Data used to generate Fig. 2C, and Fig. 3. For further details, please refer to ReadMeFirst file (available separately).
Download Data_Fig2C_3_loss.txt (4.3 Kb)
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Title Data_Fig2D_4_loss
Description Data used to generate Fig. 2D, and Fig. 4. For further details, please refer to ReadMeFirst file (available separately).
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Title Data_Fig1_AB_S1.txt
Description Data used to generate Fig. 1A, B, and Fig. S1. For further details and explanations, please refer to the ReadMeFirst file (available separately).
Download Data_Fig1_AB_S1.txt.zip (3.076 Mb)
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Title Data_Fig1_CD.txt
Description Data used to generate Fig. 1C,D. For further details and explanations, please refer to ReadMeFirst file (available separately).
Download Data_Fig1_CD.txt.zip (3.507 Mb)
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Title LossModel
Description Simulation of the two-locus loss model. For further details and explanations, please refer to ReadMeFirst file (available separately).
Download LossModel.m (13.79 Kb)
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When using this data, please cite the original publication:

Rafajlović M, Emanuelsson A, Johannesson K, Butlin RK, Mehlig B (2016) A universal mechanism generating clusters of differentiated loci during divergence-with-migration. Evolution 70(7): 1609–1621. http://dx.doi.org/10.1111/evo.12957

Additionally, please cite the Dryad data package:

Rafajlović M, Emanuelsson A, Johannesson K, Butlin RK, Mehlig B (2016) Data from: A universal mechanism generating clusters of differentiated loci during divergence-with-migration. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.170k4
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