Data from: Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation

Safran RJ, Scordato ESC, Wilkins MR, Hubbard JK, Jenkins BR, Albrecht T, Flaxman SM, Karaardic H, Vortman Y, Lotem A, Nosil P, Pap P, Shen S, Chan S-F, Parchman TL, Kane NC

Date Published: June 29, 2016

DOI: http://dx.doi.org/10.5061/dryad.17hr9

 

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Title DDRAD seq protocol
Downloaded 33 times
Description Here we provide the step by step protocol for library prep.
Download rfseq_protocol.pdf (127.6 Kb)
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Title parse_barcodes768
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Description scripts for parsing barcodes
Download parse_barcodes768.pl (7.026 Kb)
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Title pairwise differences - genotype and phenotype
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Description These are the pairwise differences in genome-wide genomic divergence and phenotype between 8 populations of barn swallows.
Download pairwise differences - genotype and phenotype.txt (5.257 Kb)
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Title Hirundo rustica genotype probabilities
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Description Genotype probabilities associated with the data analyzed in this study.
Download h_rustica_GBS_gprobs.txt (26.35 Mb)
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When using this data, please cite the original publication:

Safran RJ, Scordato ESC, Wilkins MR, Hubbard JK, Jenkins BR, Albrecht T, Flaxman SM, Karaardıç H, Vortman Y, Lotem A, Nosil P, Pap P, Shen S, Chan S-F, Parchman T, Kane NC (2016) Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation. Molecular Ecology 25(16): 3865-3883. http://dx.doi.org/10.1111/mec.13740

Additionally, please cite the Dryad data package:

Safran RJ, Scordato ESC, Wilkins MR, Hubbard JK, Jenkins BR, Albrecht T, Flaxman SM, Karaardic H, Vortman Y, Lotem A, Nosil P, Pap P, Shen S, Chan S-F, Parchman TL, Kane NC (2016) Data from: Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.17hr9
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