Data from: Patterns of selection and allele diversity of class I and class II major histocompatibility loci across the species range of sockeye salmon (Oncorhynchus nerka)

 

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Title Genotypes
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Description Excel tables containing the two digit genotypes (as used for Genepop) for MHC UBA, MHC DAB and the neutral microsatellites (Oki1a, Oki1b, Oki6, Oki29, Omy77, One8, Ots2, Ots3, Ots107, and Ots108) used to evaluate population diversity and patterns of selection in sockeye salmon. Tissue samples were collected over multiple years as indicated in each table. ID# corresponds to the population numbers given in Table 1 in the manuscript. The number of individuals sampled in each year is given along with the number of individuals with each genotype. The two digit allele designations for the published names for each DAB (Miller et al. 2001) and UBA (McClelland et al. 2011) allele are defined below the main table for each locus; published names correspond to those given in Figure 2 and throughout the text. For questions regarding genotype data please contact Dr. Kristi Miller (Kristi.Miller@dfo-mpo.gc.ca).
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When using this data, please cite the original publication:

McClelland EK, Ming TJ, Tabata A, Kaukinen KH, Beacham TD, Withler RE, Miller KM (2013) Patterns of selection and allele diversity of class I and class II major histocompatibility loci across the species range of sockeye salmon (Oncorhynchus nerka). Molecular Ecology 22(18): 4783-4800. http://dx.doi.org/10.1111/mec.12424

Additionally, please cite the Dryad data package:

McClelland EK, Ming TJ, Tabata A, Kaukinen KH, Beacham TD, Withler RE, Miller KM (2013) Data from: Patterns of selection and allele diversity of class I and class II major histocompatibility loci across the species range of sockeye salmon (Oncorhynchus nerka). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1c14t
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