Data from: Evolution of the assassin’s arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea)

Zhang J, Gordon ERL, Forthman M, Hwang WS, Walden K, Swanson DR, Johnson KP, Meier R, Weirauch C

Date Published: March 3, 2016

DOI: http://dx.doi.org/10.5061/dryad.1n6s9

 

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Title Taxon Names
Downloaded 7 times
Description Full descriptions of taxon names matched to abbreviations used in figures
Download Zhang et al.TaxonNames.txt (1.628 Kb)
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Title Partitioning scheme (transcriptomes; 23 taxa)
Downloaded 10 times
Description Partitioning scheme for 370genes and 23 taxa dataset
Download Zhang et al.370genes_23taxa_partition.txt (7.972 Kb)
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Title Alignment file (transcriptomes; 23 taxa)
Downloaded 19 times
Description Phylip alignment file for transcriptome dataset of 370 genes and 23 taxa.
Download Zhang et al.370genes_23taxa.phy (4.125 Mb)
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Title Partitioning scheme (ribosomal; 52 taxa)
Downloaded 6 times
Description Partitioning scheme for 3 gene ribosomal dataset of 52 taxa.
Download Zhang et al.Ribosomal_52taxa_partition.txt (68 bytes)
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Title Alignment file (ribosomal; 52 taxa)
Downloaded 7 times
Description Phylip alignment file of 3 gene ribosomal dataset for 52 taxa
Download Zhang et al.Ribosomal_52taxa.phy (163.4 Kb)
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Title Partitioning scheme (combined; 52 taxa)
Downloaded 5 times
Description Partitioning scheme for combined dataset
Download Zhang et al.TranscriptomeAndRibosomal_52t...on.txt (8.059 Kb)
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Title Alignment file (combined; 52 taxa)
Downloaded 8 times
Description Phylip alignment file for combined dataset of 52 taxa
Download Zhang et al.TranscriptomeAndRibosomal_52taxa.phy (9.489 Mb)
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Title Bootstrap Trees for each gene for STAR
Downloaded 4 times
Description Zip file of 370 rooted bootstrap gene trees. Each file contains 100 bootstrap replicates of each gene. Gene ID's in file names correspond to those listed Gene regions file which correspond to positions in the Phylip file.
Download Zhang et al.370genes_BootstrapTreesForSTA...ed.zip (1.564 Mb)
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Title GeneID and partition in alignment
Downloaded 6 times
Description The make up of the concatenated alignment file by Gene ID (as in STAR gene trees).
Download Zhang et al.GeneRegions.txt (10.19 Kb)
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When using this data, please cite the original publication:

Zhang J, Gordon ERL, Forthman M, Hwang WS, Walden K, Swanson DR, Johnson KP, Meier R, Weirauch C (2016) Evolution of the assassin’s arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea). Scientific Reports 6: 22177. http://dx.doi.org/10.1038/srep22177

Additionally, please cite the Dryad data package:

Zhang J, Gordon ERL, Forthman M, Hwang WS, Walden K, Swanson DR, Johnson KP, Meier R, Weirauch C (2016) Data from: Evolution of the assassin’s arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1n6s9
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