Data from: Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater stingrays

Cruz VP, Vera M, Pardo BG, Taggart J, Martinez P, Oliveira C, Foresti F

Date Published: January 21, 2016

DOI: http://dx.doi.org/10.5061/dryad.1pq21

 

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Title Contigs sequences analyzed in this study.
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Description This file with txt extension, contains the analyzed all contigs in this study.
Download 454_contigs.txt (2.266 Mb)
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Title Genotypes, variants and other information from 143 SNPs analyzed
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Description 143 SNP name, variants, dataset of the contig (source), annotation, GenBank accession number, external PCR primer sequences (Forward and Reverse), tailed extension primer (showing tails in lower case), extension primer direction and multiplexs are shown. Unfeasible SNPs are indicated in red colour.
Download Genotypes_variants.xlsx (29.02 Kb)
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Title Information from samples 89 genotype ddRad loci identified.
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Description This file contains information from samples 89 genotyped .
Download Information_samples.xlsx (40.14 Kb)
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Title This file contains the access information in NCBI of 39 samples used of to develop the SNPs.
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Description This file contains the access information in NCBI of 39 samples used to develop the SNPs.
Download Table_ information_NCBI(SRA).docx (16.26 Kb)
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When using this data, please cite the original publication:

Cruz VP, Vera M, Pardo BG, Taggart J, Martinez P, Oliveira C, Foresti F (2017) Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater stingrays. Molecular Ecology Resources 17(3): 550–556. http://dx.doi.org/10.1111/1755-0998.12564

Additionally, please cite the Dryad data package:

Cruz VP, Vera M, Pardo BG, Taggart J, Martinez P, Oliveira C, Foresti F (2017) Data from: Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater stingrays. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1pq21
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