Data from: Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA

Zinger L, Chave J, Coissac E, Iribar A, Louisanna E, Manzi S, Schilling V, Schimann H, Sommeria-Klein G, Taberlet P

Date Published: February 9, 2016

DOI: http://dx.doi.org/10.5061/dryad.1qt12

 

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Title Zinger_et_al_SBB_extracellular_samples
Downloaded 8 times
Description This file contains geographic coordinates and other characteristics of each sample
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Title Zinger_et_al_SBB_extracellular_rawdata_uniq.tar
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Description This tar.gz file contains 3 zipped fasta files of unfiltered sequencing data (i.e. assembled reads assigned to their original sample), corresponding each to Bacteria, Eukaryota and Plants amplicons.
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Title Nouragues2013_Plants_GH_uniq
Downloaded 10 times
Description This fasta file contains sequence references of the trnL P6 loop from plant specimens occurring in the Nouragues Reserve (French Guiana).
Download Nouragues2013_Plants_GH_uniq.fasta (31.93 Kb)
Download README.txt (2.451 Kb)
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Title Zinger_et_al_SBB_extracellular_filtered.tar
Downloaded 19 times
Description This tar.gz file contains 3 txt files (tab delim) of filtered sequencing data (i.e. after sequence clustering and spurious OTUs removal) and associated characteristics, corresponding each to Bacteria, Eukaryota and Plants amplicons. A full description of data curation is provided in the Supplementary Methods of Zinger et al. (2016) Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA.
Download Zinger_et_al_SBB_extracellular_filtered.tar.gz (1.373 Mb)
Download README.txt (4.1 Kb)
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When using this data, please cite the original publication:

Zinger L, Chave J, Coissac E, Iribar A, Louisanna E, Manzi S, Schilling V, Schimann H, Sommeria-Klein G, Taberlet P (2016) Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA. Soil Biology and Biochemistry 96: 16–19. http://dx.doi.org/10.1016/j.soilbio.2016.01.008

Additionally, please cite the Dryad data package:

Zinger L, Chave J, Coissac E, Iribar A, Louisanna E, Manzi S, Schilling V, Schimann H, Sommeria-Klein G, Taberlet P (2016) Data from: Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.1qt12
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