Data from: Progressive genome-wide introgression in agricultural Campylobacter coli

 

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Title BIGS_sequences
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Description Whole genome sequencing reads for BIGSdb isolates 1-30 (isolates 26,27,28,29 are already published with accession numbers: NC_009839; NC_008787; NC_003912; NC_002163). For isolates 1-3 de novo 454 sequencing was assembled using Newbler (April 2009). For isolates 4-25 and 30 de novo illumnia sequencing was assembled using Velvet 1.0.
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When using this data, please cite the original publication:

Sheppard SK, Didelot X, Jolley KA, Darling AE, Kelly DJ, Cody A, Colles FM, Strachan NJC, Ogden ID, Forbes K, French NP, Carter P, Miller WG, McCarthy ND, Owen R, Litrup E, Egholm M, Bentley SD, Parkhill J, Maiden MCJ, Falush D, Affourtit JP (2012) Progressive genome-wide introgression in agricultural Campylobacter coli. Molecular Ecology 22(4): 1051-1064. http://dx.doi.org/10.1111/mec.12162

Additionally, please cite the Dryad data package:

Sheppard SK, Didelot X, Jolley KA, Darling AE, Kelly DJ, Cody A, Colles FM, Strachan NJC, Ogden ID, Forbes K, French NP, Carter P, Miller WG, McCarthy ND, Owen R, Litrup E, Egholm M, Bentley SD, Parkhill J, Maiden MCJ, Falush D, Affourtit JP (2012) Data from: Progressive genome-wide introgression in agricultural Campylobacter coli. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.215jd
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