Data from: No ecological opportunity signal on a continental scale? Diversification and life-history evolution of African true toads (Anura: Bufonidae)

Liedtke HC, Müller H, Rödel M, Menegon M, Gonwouo LN, Barej MF, Gvoždík V, Schmitz A, Channing A, Nagel P, Loader SP

Date Published: April 11, 2017

DOI: http://dx.doi.org/10.5061/dryad.21m3t

 

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Title SuppInf1
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Description Supporting Information S1. Extended version of Methods section.
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Title SuppInf2
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Description Supporting Information S2. GenBank numbers and voucher information for individuals included in the phylogenetic reconstructions.
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Title SuppInf3
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Description Supporting Information S3. MCC tree for Bufonidae (Global Tree) recovered from time-calibrated Bayesian MCMC tree searches using BEAST under a birth-death uncorrelated lognormal relaxed clock model.
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Title SuppInf4
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Description Supporting Information S4. MCC tree for the first African radiation (FAR tree) of bufonids, recovered from time-calibrated Bayesian MCMC tree searches using BEAST under a birth-death uncorrelated lognormal relaxed clock model.
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Title SuppInf5
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Description Supporting Information S5. Phylogenetic tree recovered from pruning the FAR tree to include only a single representative of each currently recognized species (CRS tree).
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Title SuppInf6
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Description Supporting Information S6. Tree recovered from pruning the FAR tree to include only a single representative of each bGMYC delimited element (bGMYC tree).
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Title SuppInf7
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Description Supporting Information S7. Repeat of rate dynamics analyses (BAMM and BiSSE) using truncated bGMYC tree.
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Title SuppInf8
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Description Supporting Information S8. Investigating the effects of bGMYC oversplitting.
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Title global_tree
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Description MCC tree for Bufonidae (Global Tree) recovered from time-calibrated Bayesian MCMC tree searches using BEAST under a birth-death uncorrelated lognormal relaxed clock model.
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Title far_tree
Downloaded 6 times
Description MCC tree for the first African radiation (FAR tree) of bufonids, recovered from time-calibrated Bayesian MCMC tree searches using BEAST under a birth-death uncorrelated lognormal relaxed clock model.
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Title global_tree_alignment
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Description concatenated alignment used to generate the global tree
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Title far_clade_alignment
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Description concatenated alignment used to generate the far tree
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When using this data, please cite the original publication:

Liedtke HC, Müller H, Rödel M, Menegon M, Gonwouo LN, Barej MF, Gvoždík V, Schmitz A, Channing A, Nagel P, Loader SP (2016) No ecological opportunity signal on a continental scale? Diversification and life-history evolution of African true toads (Anura: Bufonidae). Evolution 70(8): 1717-1733. http://dx.doi.org/10.1111/evo.12985

Additionally, please cite the Dryad data package:

Liedtke HC, Müller H, Rödel M, Menegon M, Gonwouo LN, Barej MF, Gvoždík V, Schmitz A, Channing A, Nagel P, Loader SP (2016) Data from: No ecological opportunity signal on a continental scale? Diversification and life-history evolution of African true toads (Anura: Bufonidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.21m3t
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