Data from: Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis populations?

Westram AM, Galindo J, Alm Rosenblad M, Grahame JW, Panova M, Butlin RK

Date Published: October 29, 2014

DOI: http://dx.doi.org/10.5061/dryad.21pf0

 

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Title SP_C1_f.fastq
Downloaded 10 times
Description quality trimmed RNAseq reads: Spain, 'crab' ecotype, sample 1, forward reads
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Title SP_C1_r.fastq
Downloaded 7 times
Description quality trimmed RNAseq reads: Spain, 'crab' ecotype, sample 1, reverse reads
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Title SP_C2_f.fastq
Downloaded 6 times
Description quality trimmed RNAseq reads: Spain, 'crab' ecotype, sample 2, forward reads
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Title SP_C2_r.fastq
Downloaded 5 times
Description quality trimmed RNAseq reads: Spain, 'crab' ecotype, sample 2, reverse reads
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Title SP_W1_f.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: Spain, 'wave' ecotype, sample 1, forward reads
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Title SP_W1_r.fastq
Downloaded 4 times
Description quality trimmed RNAseq reads: Spain, 'wave' ecotype, sample 1, reverse reads
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Title SP_W2_f.fastq
Downloaded 4 times
Description quality trimmed RNAseq reads: Spain, 'wave' ecotype, sample 2, forward reads
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Title SP_W2_r.fastq
Downloaded 2 times
Description quality trimmed RNAseq reads: Spain, 'wave' ecotype, sample 2, reverse reads
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Title SW_C1_f.fastq
Downloaded 7 times
Description quality trimmed RNAseq reads: Sweden, 'crab' ecotype, sample 1, forward reads
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Title SW_C1_r.fastq
Downloaded 7 times
Description quality trimmed RNAseq reads: Sweden, 'crab' ecotype, sample 1, reverse reads
Download SW_C1_r.fastq.gz (1.003 Gb)
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Title SW_C2_f.fastq
Downloaded 2 times
Description quality trimmed RNAseq reads: Sweden, 'crab' ecotype, sample 2, forward reads
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Title SW_C2_r.fastq
Downloaded 1 time
Description quality trimmed RNAseq reads: Sweden, 'crab' ecotype, sample 2, reverse reads
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Title SW_W1_f.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: Sweden, 'wave' ecotype, sample 1, forward reads
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Title SW_W1_r.fastq
Downloaded 6 times
Description quality trimmed RNAseq reads: Sweden, 'wave' ecotype, sample 1, reverse reads
Download SW_W1_r.fastq.gz (1.155 Gb)
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Title SW_W2_f.fastq
Downloaded 2 times
Description quality trimmed RNAseq reads: Sweden, 'wave' ecotype, sample 2, forward reads
Download SW_W2_f.fastq.gz (1.015 Gb)
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Title SW_W2_r.fastq
Downloaded 5 times
Description quality trimmed RNAseq reads: Sweden, 'wave' ecotype, sample 2, reverse reads
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Title UK_C1_f.fastq
Downloaded 6 times
Description quality trimmed RNAseq reads: United Kingdom, 'crab' ecotype, sample 1, forward reads
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Title UK_C1_r.fastq
Downloaded 8 times
Description quality trimmed RNAseq reads: United Kingdom, 'crab' ecotype, sample 1, reverse reads
Download UK_C1_r.fastq.gz (631.8 Mb)
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Title UK_C2_f.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: United Kingdom, 'crab' ecotype, sample 2, forward reads
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Title UK_C2_r.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: United Kingdom, 'crab' ecotype, sample 2, reverse reads
Download UK_C2_r.fastq.gz (952.1 Mb)
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Title UK_W1_f.fastq
Downloaded 2 times
Description quality trimmed RNAseq reads: United Kingdom, 'wave' ecotype, sample 1, forward reads
Download UK_W1_f.fastq.gz (1.714 Gb)
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Title UK_W1_r.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: United Kingdom, 'wave' ecotype, sample 1, reverse reads
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Title UK_W2_f.fastq
Downloaded 3 times
Description quality trimmed RNAseq reads: United Kingdom, 'wave' ecotype, sample 2, forward reads
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Title UK_W2_r.fastq
Downloaded 4 times
Description quality trimmed RNAseq reads: United Kingdom, 'wave' ecotype, sample 2, reverse reads
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Title Littorina.mpileup
Downloaded 4 times
Description mpileup file of Littorina saxatilis RNAseq reads from 12 samples mapped to the reference genome. sample 1: Spain, crab ecotype, replicate 1. sample 2: Spain, crab ecotype, replicate 2. sample 3: Spain, wave ecotype, replicate 1. sample 4: Spain, wave ecotype, replicate 2. sample 5: Sweden, crab ecotype, replicate 1. sample 6: Sweden, crab ecotype, replicate 2. sample 7: Sweden, wave ecotype, replicate 1. sample 8: Sweden, wave ecotype, replicate 2. sample 9: UK, crab ecotype, replicate 1. sample 10: UK, crab ecotype, replicate 2. sample 11: UK, wave ecotype, replicate 1. sample 12: UK, wave ecotype, replicate 2.
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Title Littorina_analysed_genome_contigs.fasta
Downloaded 7 times
Description Contains the 6790 Littorina saxatilis genome contigs to which RNAseq reads could be mapped and that passed filters. These are the contigs that outlier analyses in the paper are based on.
Download Littorina_analysed_genome_contigs.fasta (9.882 Mb)
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When using this data, please cite the original publication:

Westram AM, Galindo J, Alm Rosenblad M, Grahame JW, Panova M, Butlin RK (2014) Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis populations? Molecular Ecology 23(18): 4603-4616. http://dx.doi.org/10.1111/mec.12883

Additionally, please cite the Dryad data package:

Westram AM, Galindo J, Alm Rosenblad M, Grahame JW, Panova M, Butlin RK (2014) Data from: Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis populations? Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.21pf0
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