Data from: Comparative analysis of 2D and 3D distance measurements to study spatial genome organization

Finn EH, Pegoraro G, Shachar S, Misteli T

Date Published: February 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.236j7

 

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Title README
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Title Spot Position Measurements
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Description Tables including the Acapella output (spot positions) and the R-calculated spot-to-spot distances by experiment.
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Title Acapella Scripts and Parameters
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Description Acapella scripts and parameter files used to analyze image files and generate spot positions
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Title Rmd Scripts
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Description R markdown scripts used to calculate distances from Acapella output spot positions and perform subsequent analyses
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Title BC_160524_1000 images
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Description Images from acquisition BC_160524 with 1 micron z-slices
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Title BC_160525_300 images
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Description Images from BC_160525 experiment with 300 nm z-slices
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Title BC_160531_300 images
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Description Images from BC_160531 acquisition with 300 nm z-slices
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Title BC_160614_300 images
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Description Images from BC_160614 acquisition with a 300 nm z-slices
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When using this data, please cite the original publication:

Finn EH, Pegoraro G, Shachar S, Misteli T (2017) Comparative analysis of 2D and 3D distance measurements to study spatial genome organization. Methods 123: 47-55. http://dx.doi.org/10.1016/j.ymeth.2017.01.007

Additionally, please cite the Dryad data package:

Finn EH, Pegoraro G, Shachar S, Misteli T (2017) Data from: Comparative analysis of 2D and 3D distance measurements to study spatial genome organization. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.236j7
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