Data from: Population genomics of a symbiont in the early stages of a pest invasion

 

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Title rawvar_rmdup.ind1
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Description Raw SNP data from Index 1 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
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Title rawvar_rmdup.ind2
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Description Raw SNP data from Index 2 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
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Title rawvar_rmdup.ind3
Downloaded 5 times
Description Raw SNP data from Index 3 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind3.vcf (9.578 Kb)
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Title rawvar_rmdup.ind4
Downloaded 8 times
Description Raw SNP data from Index 4 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind4.vcf (23.21 Kb)
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Title rawvar_rmdup.ind5
Downloaded 6 times
Description Raw SNP data from Index 5 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind5.vcf (13.18 Kb)
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Title rawvar_rmdup.ind6
Downloaded 7 times
Description Raw SNP data from Index 6 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind6.vcf (19.22 Kb)
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Title rawvar_rmdup.ind7
Downloaded 6 times
Description Raw SNP data from Index 7 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind7.vcf (78.47 Kb)
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Title rawvar_rmdup.ind8
Downloaded 6 times
Description Raw SNP data from Index 8 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind8.vcf (12.20 Kb)
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Title rawvar_rmdup.ind9
Downloaded 6 times
Description Raw SNP data from Index 9 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind9.vcf (9.571 Kb)
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Title rawvar_rmdup.ind10
Downloaded 6 times
Description Raw SNP data from Index 10 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind10.vcf (19.05 Kb)
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Title rawvar_rmdup.ind11
Downloaded 4 times
Description Raw SNP data from Index 11 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind11.vcf (10.03 Kb)
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Title rawvar_rmdup.ind12
Downloaded 4 times
Description Raw SNP data from Index 12 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind12.vcf (13.46 Kb)
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Title rawvar_rmdup.ind13
Downloaded 5 times
Description Raw SNP data from Index 13 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind13.vcf (28.94 Kb)
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Title rawvar_rmdup.ind14
Downloaded 6 times
Description Raw SNP data from Index 14 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind14.vcf (10.08 Kb)
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Title rawvar_rmdup.ind15
Downloaded 4 times
Description Raw SNP data from Index 15 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind15.vcf (9.606 Kb)
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Title rawvar_rmdup.ind16
Downloaded 6 times
Description Raw SNP data from Index 16 for Ishikawaella U.S. 2009 (ground zero) from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind16.vcf (19.93 Kb)
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Title rawvar_rmdup.ind17
Downloaded 5 times
Description Raw SNP data from Index 17 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind17.vcf (11.92 Kb)
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Title rawvar_rmdup.ind18
Downloaded 4 times
Description Raw SNP data from Index 18 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind18.vcf (16.23 Kb)
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Title rawvar_rmdup.ind19
Downloaded 6 times
Description Raw SNP data from Index 19 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind19.vcf (10.87 Kb)
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Title rawvar_rmdup.ind20
Downloaded 2 times
Description Raw SNP data from Index 20 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind20.vcf (14.09 Kb)
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Title rawvar_rmdup.ind21
Downloaded 5 times
Description Raw SNP data from Index 20 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind21.vcf (14.31 Kb)
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Title rawvar_rmdup.ind22
Downloaded 7 times
Description Raw SNP data from Index 22 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind22.vcf (14.00 Kb)
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Title rawvar_rmdup.ind23
Downloaded 4 times
Description Raw SNP data from Index 23 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind23.vcf (9.594 Kb)
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Title rawvar_rmdup.ind24
Downloaded 5 times
Description Raw SNP data from Index 24 for Ishikawaella U.S. 2011 from Illumina HiSeq generated using GATK.
Download rawvar_rmdup.ind24.vcf (53.89 Kb)
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When using this data, please cite the original publication:

Brown AMV, Huynh LY, Bolender CM, Nelson KG, McCutcheon JP (2013) Population genomics of a symbiont in the early stages of a pest invasion. Molecular Ecology 23(6): 1516–1530. http://dx.doi.org/10.1111/mec.12366

Additionally, please cite the Dryad data package:

Brown AMV, Huynh LY, Bolender CM, Nelson KG, McCutcheon JP (2013) Data from: Population genomics of a symbiont in the early stages of a pest invasion. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.266h9
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