Data from: DBGC: a database of human gastric cancer

Wang C, Zhang J, Cai M, Zhu Z, Gu W, Yu Y, Zhang X

Date Published: January 25, 2016

DOI: http://dx.doi.org/10.5061/dryad.271dk

 

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Title DBGC: A Database of Human Gastric Cancer
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Description Our work collected the data from transcriptome, proteome, mutation, biomarker and drug-sensitive genes. Totally comes out 9 files: 1,transcriptome.txt -- transcriptome related to gastric cancer, that contains the type of experiment, platform, sample, volume, result and the linkage of those. 2,up_genes.txt -- up-regulated gene list come from transcriptome which based on experiment 3,down_genes.txt -- up-regulated gene list come from transcriptome which based on experiment 4,proteome.txt -- proteome related to gastric cancer, that contains the type of experiment, sample, technology and result etc. 5,up_proteins.txt -- up-regulated genes list come from proteome 6,down_proteins.txt -- down-regulated genes list come from proteome 7,mutation.txt -- mutation related to gastric cancer, that mainly include mutation type, postion etc. 8,biomarker.txt -- biomarker related to gastric cancer including types, stages as well sensitivity, specifity ect. 9,pharmacogenomics.txt -- include gastric cancer gene and drug detail as well as resistance mechanism etc
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When using this data, please cite the original publication:

Wang C, Zhang J, Cai M, Zhu Z, Gu W, Yu Y, Zhang X (2015) DBGC: a database of human gastric cancer. PLOS ONE 10(11): e0142591. http://dx.doi.org/10.1371/journal.pone.0142591

Additionally, please cite the Dryad data package:

Wang C, Zhang J, Cai M, Zhu Z, Gu W, Yu Y, Zhang X (2015) Data from: DBGC: a database of human gastric cancer. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.271dk
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