Data from: Cross-platform compatibility of de novo-aligned SNPs in a non-model butterfly genus

Campbell EO, Davis CS, Dupuis JR, Muirhead K, Sperling FAH

Date Published: June 20, 2017

DOI: http://dx.doi.org/10.5061/dryad.2bc7c

 

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Title NextSeq_raw_fastq
Downloaded 4 times
Description Zipped file containing 24 raw fastq files of 11 butterfly species. A ddRAD library was prepared using PstI and MspI restriction enzymes, following the protocol of Peterson et al. 2012, and then sequenced on an Illumina NextSeq 500.
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Title HiSeq_raw_fastq
Downloaded 7 times
Description Zipped file containing 24 raw fastq files of 11 butterfly species. A double enzyme GBS library was prepared using PstI and MspI restriction enzymes, following the protocol of Poland et al. 2012, and then sequenced on an Illumina HiSeq 2000.
Download HiSeq_raw_fastq.zip (1.363 Gb)
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Title all_5%_structure_input
Downloaded 4 times
Description Input file for STRUCTURE analysis of the HiSeq + NextSeq dataset filtered with a minor allele frequency of 5%.
Download all_5%.str (288.2 Kb)
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Title processed nexus input files
Downloaded 5 times
Description Zipped file containing all 21 processed nexus files used for phylogenetic analyses
Download processed nexus input files.zip (10.10 Mb)
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When using this data, please cite the original publication:

Campbell EO, Davis CS, Dupuis JR, Muirhead K, Sperling FAH (2017) Cross-platform compatibility of de novo- aligned SNPs in a non-model butterfly genus. Molecular Ecology Resources, online in advance of print. http://dx.doi.org/10.1111/1755-0998.12695

Additionally, please cite the Dryad data package:

Campbell EO, Davis CS, Dupuis JR, Muirhead K, Sperling FAH (2017) Data from: Cross-platform compatibility of de novo-aligned SNPs in a non-model butterfly genus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2bc7c
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