Data from: Antennal transcriptome analysis and expression profiles of odorant binding proteins in Eogystia hippophaecolus (Lepidoptera: Cossidae)

Hu P, Tao J, Cui M, Gao C, Lu P, Luo Y

Date Published: September 2, 2016

DOI: http://dx.doi.org/10.5061/dryad.2dj50

 

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Title Figure 3 Neighbor-joining phylogenetic tree of chemosensory proteins (CSPs)
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Description Figure 3 Neighbor-joining phylogenetic tree of chemosensory proteins (CSPs) The NJ phylogenetic analysis of CSPs of E. hippophaecolus (EhipCSP, red) was performed with reference CSPs of D. melanogaster (DmelCSP, Diptera, blue) and CSPs of Lepidoptera species (black). The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥0.6 are shown at the corresponding nodes. The scale bar represents 0.5 substitutions per site.
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Title Figure 4 Neighbor-joining phylogenetic tree of sensory neuron membrane proteins (SNMPs)
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Description Figure 4 Neighbor-joining phylogenetic tree of sensory neuron membrane proteins (SNMPs) The NJ phylogenetic analysis of SNMPs of E. hippophaecolus (EhipSNMP, red) was performed with reference SNMPs of D. ponderosae (DponSNMP, purple), I. typographus (ItypSNMP, purple), T. molitor (TmolSNMP, purple), T. castaneum (TcasSNMP, purple), D. melanogaster (DmelSNMP, Diptera, blue), B. mori (BmorSNMP, Lepidoptera, dark), H.armigera (HarmSNMP, dark),and A. mellifera (AmelSNMP, Hymenoptera, green). The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥0.6 are shown at the corresponding nodes. The scale bar represents 0.04 substitutions per site.
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Title Figure 7 Neighbor-joining phylogenetic tree of gustatory receptors (GRs)
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Description Figure 7 Neighbor-joining phylogenetic tree of gustatory receptors (GRs) The NJ phylogenetic analysis of GRs of E. hippophaecolus (EhipGR, red) was performed with reference GRs of B.mori (BmorGR, dark), H.armigera (HarmGR, dark)[85], A. mellifera (AmelGR, Hymenoptera, green), T. castaneum (TcasGR, Coleoptera, purple) and D. melanogaster (DmelGR, Diptera, blue). The GRs group labelled with red circle refers to detect CO2. sugar and bitter. The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥0.6 are shown at the corresponding nodes. The scale bar represents 0.25 substitutions per site.
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Title Figure 5 Neighbor-joining phylogenetic tree of odorant receptors (ORs)
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Description The NJ phylogenetic analysis of ORs of E. hippophaecolus (EhipOR, red) was performed with reference ORs of D. melanogaster (DmelOR, Diptera, blue) and ORs of Lepidoptera species (black). The red circles refer to Orco and PR lineage. The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥0.6 are shown at the corresponding nodes. The scale bar represents 0.5 substitutions per site.
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Title Figure 6 Neighbor-joining phylogenetic tree of ionotropic receptors (IRs)
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Description The NJ phylogenetic analysis of IRs of E. hippophaecolus (EhipIR, red) was performed with reference IRs of H.armigera (HarmIR, black), D. melanogaster (DmelIR, Diptera, blue) and IRs of other Lepidoptera species (black). The IRs groups labelled with red circle were reference of Van Schooten[82]. The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥0.6 are shown at the corresponding nodes. The scale bar represents 0.5 substitutions per site.
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Title Figure 2 Neighbor-joining phylogenetic tree of odorant-binding proteins (OBPs)
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Description The NJ phylogenetic analysis of OBPs of E. hippophaecolus (EhipOBP, red) was performed with reference OBPs of D. melanogaster (DmelOBP, Diptera, blue) and OBPs of Lepidoptera species (black)[79]. The red circles refer to PBP/GOBP lineage. Pale yellow sector refer to the Lepidoptera-specific lineages. The stability of the nodes was assessed by bootstrap analysis with 1,000 replications, and only bootstrap values ≥ 0.6 are shown at the corresponding nodes. The scale bar represents 05 substitutions per site.
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When using this data, please cite the original publication:

Hu P, Tao J, Cui M, Gao C, Lu P, Luo Y (2016) Antennal transcriptome analysis and expression profiles of odorant binding proteins in Eogystia hippophaecolus (Lepidoptera: Cossidae). BMC Genomics 17(1): 651. http://dx.doi.org/10.1186/s12864-016-3008-4

Additionally, please cite the Dryad data package:

Hu P, Tao J, Cui M, Gao C, Lu P, Luo Y (2016) Data from: Antennal transcriptome analysis and expression profiles of odorant binding proteins in Eogystia hippophaecolus (Lepidoptera: Cossidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2dj50
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