Data from: Identifying patterns of dispersal, connectivity, and selection in the sea scallop, Placopecten magellanicus, using RAD-seq derived SNPs

Van Wyngaarden M, Snelgrove PVR, DiBacco C, Hamilton LC, Rodríguez-Ezpeleta N, Jeffery NW, Stanley RR, Bradbury IR

Date Published: August 29, 2016

DOI: http://dx.doi.org/10.5061/dryad.2nh23

 

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Title VanWyngaardenM_etal_GeogDistMatrix
Downloaded 7 times
Description This file contains matrices of pairwise geographic distances (km; shortest distance and estimated ocean current-based distance) between 12 populations of the sea scallop, Placopecten magellanicus, used along with 7163 RAD-seq derived SNPs to estimate isolation-by-distance and dispersal distances among populations. Population names and geographic coordinates can be found in Table 1 of the associated publication.
Download VanWyngaardenM_etal_PopStructure_GeogDist.xlsx (11.22 Kb)
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Title VanWyngaardenM_etal_RADseq_SNPs
Downloaded 25 times
Description This VCF file contains 7216 RAD-seq derived SNPs detected among 12 Northwest Atlantic Ocean populations of the sea scallop, Placopecten magellanicus. The program stacks v0.9999 was used to call variants; parameters can be found in Table S1 of the associated publication.
Download VanWyngaardenM_etal_PopStructure_SNPMap4b.vcf (7.305 Mb)
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When using this data, please cite the original publication:

Van Wyngaarden M, Snelgrove PVR, DiBacco C, Hamilton LC, Rodríguez-Ezpeleta N, Jeffery NW, Stanley RRE, Bradbury IR (2017) Identifying patterns of dispersal, connectivity and selection in the sea scallop, Placopecten magellanicus, using RADseq-derived SNPs. Evolutionary Applications 10(1): 102–117. http://dx.doi.org/10.1111/eva.12432

Additionally, please cite the Dryad data package:

Van Wyngaarden M, Snelgrove PVR, DiBacco C, Hamilton LC, Rodríguez-Ezpeleta N, Jeffery NW, Stanley RR, Bradbury IR (2016) Data from: Identifying patterns of dispersal, connectivity, and selection in the sea scallop, Placopecten magellanicus, using RAD-seq derived SNPs. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2nh23
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