Data from: Costs of selfing prevent the spread of a self-compatibility mutation that causes reproductive assurance

Layman NC, Fernando MTR, Herlihy C, Busch JW

Date Published: December 28, 2016

DOI: http://dx.doi.org/10.5061/dryad.2pj0j

 

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Title 2014+2015 Field data
Downloaded 6 times
Description Data on maternal fitness taken from plants in experimental arrays in 2014 and 2015. Plants are coded by their family of origin and S-locus genotype (0=SC, 1=SI).
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Title 2014+2015 Greenhouse data
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Description Floral trait data measured on plants in controlled glasshouses in 2014 and 2015. Plants are coded by family of origin and S-locus genotype. Forced self pollinations permitted measures of self-compatibility, and estimates of autonomous fruit set are also included.
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Title Emasculation experiment
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Description This file contains data on fruit and seed set of emasculated flowers visited by a single pollinator. This experiment was conducted in spring 2015 in site 1 (the Waco glade).
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Title Pollinator Data 2014
Downloaded 4 times
Description This file contains information on pollinators and their sequence of visits for plants in experimental arrays (2014 only). Plants in the top row were given an index of 1-8 (reading from left to right). Plants in the second, third, and fourth rows were given an index of 9-16, 17-24, and 25-32, respectively.The first tab has information on the first day each plant flowered. Pollinator codes were:Ant = ant; Beetle = beetle; B = honeybee or carpenter bee; L = lepidoptera; F = fly (excluding bee-fly); BF = bee-fly; AH = andrenidae/halictidae; K = katydid U = unknown.
Download Pollinator Data 2014.xlsx (66.24 Kb)
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Title Pollinator Data 2015
Downloaded 2 times
Description This file contains information on pollinators and their sequence of visits for plants in experimental arrays (2015 only). Plants in the top row were given an index of 1-8 (reading from left to right). Plants in the second, third, and fourth rows were given an index of 9-16, 17-24, and 25-32, respectively.The first tab has information on the first day each plant flowered. Pollinator codes were:Ant = ant; Beetle = beetle; B = honeybee or carpenter bee; L = lepidoptera; F = fly (excluding bee-fly); BF = bee-fly; AH = andrenidae/halictidae; K = katydid U = unknown.
Download Pollinator Data 2015.xlsx (130.2 Kb)
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Title S-locus Genotyping 2014
Downloaded 6 times
Description Information on the S-locus genotype of plants, assayed with SSCP (single-strand conformation polymorphism). Within each family, we adopted a convention for scoring the 4 possible genotypes. A = Lal2-a2/Lal2-a2 homozygote (SC plant); D = Si/Sj heterozygote (SI plant). B and C denote plants that are heterozygous for the Lal2-a2 mutation (these plants were not used).
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Title S-locus genotyping 2015
Downloaded 3 times
Description Information on the S-locus genotype of plants, assayed with SSCP (single-strand conformation polymorphism). Within each family, we adopted a convention for scoring the 4 possible genotypes. A = Lal2-a2/Lal2-a2 homozygote (SC plant); D = Si/Sj heterozygote (SI plant). B and C denote plants that are heterozygous for the Lal2-a2 mutation (these plants were not used). We also post here the total numbers of A,B,C, and D genotypes in each family in 2014 and 2015.
Download S-locus genotyping 2015.xlsx (26.56 Kb)
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Title Fragment Analysis 2014
Downloaded 5 times
Description Progeny array data for plants in the 2014 experimental arrays, in MLTR format. Plants were genotyped at 6 hypervariable microsatellite markers. Maternal plants are denoted with (!). These data were also used for paternity inference, following conversion to the Cervus file format.
Download Fragment Analysis 2014.xlsx (93.58 Kb)
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Title Fragment Analysis 2015
Downloaded 4 times
Description Progeny array data for plants in the 2015 experimental arrays, in MLTR format. Plants were genotyped at 6 hypervariable microsatellite markers. Maternal plants are denoted with (!). These data were also used for paternity inference, following conversion to the Cervus file format.
Download Fragment Analysis 2015.xlsx (107.6 Kb)
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Title main.cpp
Downloaded 6 times
Description C++ code that simulates the S-locus and 1000 unlinked loci causing inbreeding depression. Self-incompatible populations reach a mutation-selection-drift equilibrium, whereupon a SC mutation invades. The final frequency of the SC mutation is then tabulated.
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Title Individual.h
Downloaded 6 times
Description This file contains functions called by the C++ code, main.cpp.
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Title Locus
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Description This file contains functions called by the C++ code, main.cpp.
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When using this data, please cite the original publication:

Layman NC, Fernando MTR, Herlihy CR, Busch JW (2017) Costs of selfing prevent the spread of a self-compatibility mutation that causes reproductive assurance. Evolution 71(4): 884-897. http://dx.doi.org/10.1111/evo.13167

Additionally, please cite the Dryad data package:

Layman NC, Fernando MTR, Herlihy C, Busch JW (2017) Data from: Costs of selfing prevent the spread of a self-compatibility mutation that causes reproductive assurance. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2pj0j
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