Data from: Genetics, morphology, advertisement calls, and historical records distinguish six new polyploid species of African clawed frog (Xenopus, Pipidae) from West and Central Africa

Evans BJ, Carter TF, Greenbaum E, Gvoždík V, Kelley DB, McLaughlin PJ, Pauwels OSG, Portik DM, Stanley EL, Tinsley RC, Tobias ML, Blackburn DC

Date Published: December 22, 2015

DOI: http://dx.doi.org/10.5061/dryad.2qb35

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title mtDNA_simple
Downloaded 19 times
Description This is a nexus file that includes alignments of mitochondrial DNA sequences that were analyzed in this study
Download mtDNA_simple.nxs (1.563 Mb)
Details View File Details
Title mtDNA_simple.nxs
Downloaded 11 times
Description This is an input file for BEAST that was generated from the nexus file and that was used to analyze the mitochondrial DNA sequence alignment
Download mtDNA_simple.nxs.xml (1.597 Mb)
Details View File Details
Title mtDNA_con
Downloaded 8 times
Description This is a consensus tree generated from the BEAST run of the mitochondrial DNA data.
Download mtDNA_con.tre (242.9 Kb)
Details View File Details
Title R1R2_pileup_simple
Downloaded 9 times
Description This is a nexus file that includes concatenated data from cloned and directly amplified sequences of the autosomal genes RAG1 and RAG2. These data were generated from genomic DNA and the concatenation combines sequences that are putatively syntenous (co-linear) on the same chromosome.
Download R1R2_pileup_simple.nxs (333.2 Kb)
Details View File Details
Title R1R2_pileup_simple.nxs
Downloaded 7 times
Description This is the xml file that was generated from the RAG1 and RAG2 concatenated nexus file that was used as input for the BEAST analysis.
Download R1R2_pileup_simple.nxs.xml (354.0 Kb)
Details View File Details
Title R1R2con
Downloaded 6 times
Description This is the consensus tree from the BEAST analysis of the concatenated sequence data from RAG1 and RAG2.
Download R1R2con.tre (84.17 Kb)
Details View File Details
Title Male vocalization of X. allofraseri specimen MCZ A-148176
Downloaded 12 times
Description Male vocalization of X. allofraseri specimen MCZ A-148176
Download allofraseri_bioko.6.0.27.22.2.3_MCZ A-148176.wav (40.88 Kb)
Details View File Details
Title Male vocalization of X. eysoole; specimen MCZ A-148129 or MCZ A-148130
Downloaded 8 times
Description Male vocalization of X. eysoole; specimen MCZ A-148129 or MCZ A-148130 (we are not sure which of these individuals was recorded)
Download MCZ A-148129_or_MCZ A-148130_bamenda3(2)....f..wav (131.7 Kb)
Details View File Details
Title Male vocalization of X. fischbergi.
Downloaded 11 times
Description Male vocalization of X. fischbergi. No specimen ID is associated with this recording.
Download MW.10907T3.single click.wav (48.82 Kb)
Details View File Details
Title Male vocalization of X. kobeli; field ID number BJE3073
Downloaded 15 times
Description Male vocalization of X. kobeli; field ID number BJE3073
Download kobeli_BJE3073.3.53.i.bpfil.wav (74.25 Kb)
Details View File Details
Title Male vocalization of X.kobeli; field ID number BJE3157
Downloaded 22 times
Description Male vocalization of X.kobeli; field ID number BJE3157
Download kobeli_BJE3157.14.01.b.bpfil.wav (132.2 Kb)
Details View File Details
Title Male vocalization of X. parafraseri; specimen ID CAS 249961
Downloaded 10 times
Description Male vocalization of X. parafraseri; specimen ID CAS 249961
Download yaounde4.18.34.f.wav (237.0 Kb)
Details View File Details
Title Male vocalization of X. mellotropicalis
Downloaded 19 times
Description Male vocalization of X. mellotropicalis; no specimen ID is associated with this recording.
Download mellotropicalis.wav.one call.wav (72.90 Kb)
Details View File Details
Title Male vocalization of X. calcaratus
Downloaded 6 times
Description Male vocalization of X. calcaratus; no specimen is associated with this recording.
Download Sil.sp.32.40-55.e.wav (25.47 Kb)
Details View File Details

When using this data, please cite the original publication:

Evans BJ, Carter TF, Greenbaum E, Gvoždík V, Kelley DB, McLaughlin PJ, Pauwels OSG, Portik DM, Stanley EL, Tinsley RC, Tobias ML, Blackburn DC (2015) Genetics, morphology, advertisement calls, and historical records distinguish six new polyploid species of African clawed frog (Xenopus, Pipidae) from West and Central Africa. PLoS ONE 10(12): e0142823. http://dx.doi.org/10.1371/journal.pone.0142823

Additionally, please cite the Dryad data package:

Evans BJ, Carter TF, Greenbaum E, Gvoždík V, Kelley DB, McLaughlin PJ, Pauwels OSG, Portik DM, Stanley EL, Tinsley RC, Tobias ML, Blackburn DC (2015) Data from: Genetics, morphology, advertisement calls, and historical records distinguish six new polyploid species of African clawed frog (Xenopus, Pipidae) from West and Central Africa. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2qb35
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: