Data from: From benchtop to desktop: important considerations when designing amplicon sequencing workflows

Murray DC, Coghlan ML, Bunce M

Date Published: April 27, 2015

DOI: http://dx.doi.org/10.5061/dryad.2qf0t

 

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Title Experiment1
Downloaded 64 times
Description Fasta files of amplicon reads from Experiment 1 for both the GS Junior and Ion Torrent. All fasta files are non-dereplicated and have been separated into sample batches based on MID (index) tags and all primers have been removed. No further quality or abundance filtering has been performed on the fasta file.
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Title Experiment2
Downloaded 62 times
Description Fasta files of amplicon reads from Experiment 2 for both the MiSeq and Ion Torrent. All fasta files are non-dereplicated and have been separated into sample batches based on MID (index) tags and all primers have been removed. No further quality or abundance filtering has been performed on the fasta file.
Download Experiment2.zip (990.4 Kb)
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Title Experiment5
Downloaded 66 times
Description Fasta file of amplicon reads from Experiment 5 for the Ion Torrent. The file non-dereplicated and has only been separated based on MID (index) tag. Primers have not been removed and no quality or abundance filtering has been performed on the fasta file.
Download Experiment5.zip (532.5 Kb)
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When using this data, please cite the original publication:

Murray DC, Coghlan ML, Bunce M (2015) From benchtop to desktop: important considerations when designing amplicon sequencing workflows. PLOS ONE 10(4): e0124671. http://dx.doi.org/10.1371/journal.pone.0124671

Additionally, please cite the Dryad data package:

Murray DC, Coghlan ML, Bunce M (2015) Data from: From benchtop to desktop: important considerations when designing amplicon sequencing workflows. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2qf0t
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