Data from: The effect of geographical scale of sampling on DNA barcoding

 

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Title Supplementary Figure 1: Neighbour-Joining tree on complete European dataset of Agabini diving-beetles
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Description Produced from PAUP with a Kimura-2-Parameter model
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Title Supplementary Figure 2: Strict consensus tree of four most parsimonious trees from complete European dataset of Agabini diving-beetles
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Description Parsimony analysis done in TNT with driven search strategy using tree-fusing and sectorial searches.
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Title Supplementary Figure 3: Majority-rule consensus tree from Bayesian analysis on complete European dataset of Agabini diving-beetles
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Description Bayesian analysis done in MrBayes 3.2 with codon-partitioned GTR+I+G model and using a parsimony topology as start tree.
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Title Neighbour joining tree in nexus format European Agabini
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Title Bayesian tree in nexus format European Agabini
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Title 43 most parsimonious trees from parsimony analysis in nexus format European Agabini
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Title Dated CO1 gene tree in nexus format on species level matrix of European Agabini
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Description Produced from BEAST with codon partitioned GTR+I+G model.
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Title Species level CO1 dataset in nexus format for gene-tree dating of European Agabini
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Download Agabini_CO1_species_level_for_dating.nex (57.17 Kb)
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Title Complete European Agabini dataset in tab-delimited text format with CO1 sequences, species names, unique ID, geographic origin and coordinates
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Description Tab-delimited text file with the following fields; BMNH number Family Subfamily Genus Species Name State Country Lat_dec Lon_dec CO1_sequence DNA.Plate DNA.Plate.Well
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Title Complete CO1 dataset of European Agabini in nexus format
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When using this data, please cite the original publication:

Bergsten J, Bilton DT, Fujisawa T, Elliott M, Monaghan MT, Balke M, Hendrich L, Geijer J, Herrmann J, Foster GN, Ribera I, Nilsson AN, Barraclough TG, Vogler AP (2012) The effect of geographical scale of sampling on DNA barcoding. Systematic Biology 61(5): 851-869. http://dx.doi.org/10.1093/sysbio/sys037

Additionally, please cite the Dryad data package:

Bergsten J, Bilton DT, Fujisawa T, Elliott M, Monaghan MT, Balke M, Hendrich L, Geijer J, Herrmann J, Foster GN, Ribera I, Nilsson AN, Barraclough TG, Vogler AP (2012) Data from: The effect of geographical scale of sampling on DNA barcoding. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2rg92p5v
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