Data from: Characterization of the transcriptome and gene expression of four different tissues in the ecologically relevant sea urchin Arbacia lixula using RNA-seq

Perez-Portela R, Turon X, Riesgo A

Date Published: December 2, 2015

DOI: http://dx.doi.org/10.5061/dryad.2rs4k

 

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Title RSEM_files from four different tissues and 8 libraries
Downloaded 23 times
Description RSEM files from 4 different tissues of Arbacia lixula, the black sea urchin, and two replicates per tissue (8 libraries in total)
Download RSEM_files from four different tissues an...es.zip (18.79 Mb)
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Title DESeq_results
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Description DEseq results of the comparison of two somatic (Coelomocytes vs Digestive) and two reproductive tissues (Ovary vs Testis) in the black sea urchin Arbacia lixula
Download DESeq_results.zip (1.535 Mb)
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Title Arbacia lixula_Assemblies_Tissues
Downloaded 26 times
Description De novo assemblies of the transcriptomes of four different tissues (Coelomocytes, Digestive, Ovary and Testis) in the black sea urchin Arbacia lixula
Download Arbacia lixula_Assemblies_Tissues.zip (122.4 Mb)
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Title Arbacia lixula_Annotation_tissues
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Description Annotations for the transcriptomes of four different tissues (Coelomocytes, Digestive, Ovary and Testis) in the black sea urchin Arbacia lixula
Download Arbacia lixula_Annotation_tissues.zip (390.3 Kb)
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Title Arbacia_lixula_Reference_Assembly_Trinity
Downloaded 22 times
Description De novo assembly of the Reference transcriptome of the black sea urchin Arbacia lixula. The reference transcriptome includes transcritps from coelomocytes, digestive, ovary and testis
Download Arbacia_lixula_Reference_Assembly_Trinity.fasta (212.6 Mb)
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Title Arbacila_lixula_Reference_annot
Downloaded 10 times
Description Annotations of the reference transcriptome of the black sea urchin Arbacia lixula
Download Arbacila_lixula_Reference_annot.annot (516.5 Kb)
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When using this data, please cite the original publication:

Perez-Portela R, Turon X, Riesgo A (2016) Characterization of the transcriptome and gene expression of four different tissues in the ecologically relevant sea urchin Arbacia lixula using RNA-seq. Molecular Ecology Resources 16(3): 794-808. http://dx.doi.org/10.1111/1755-0998.12500

Additionally, please cite the Dryad data package:

Perez-Portela R, Turon X, Riesgo A (2015) Data from: Characterization of the transcriptome and gene expression of four different tissues in the ecologically relevant sea urchin Arbacia lixula using RNA-seq. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2rs4k
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