Data from: Phylogenies, the comparative method, and the conflation of tempo and mode

Kaliontzopoulou A, Adams DC

Date Published: October 15, 2015

DOI: http://dx.doi.org/10.5061/dryad.2ss46

 

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Title Online Appendix 1
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Description AICC SCORES OF MODELS FIT TO EMPIRICAL DATASETS
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Title Online Appendix 2
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Description BM SIMULATIONS UNDER VARYING MODEL PARAMETERS
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Title Online Appendix 3
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Description SIMULATION EXPERIMENT DEMONSTRATING THE EQUIVALENCE BETWEEN THE CENSORED APPROACH (O’MEARA ET AL. 2006) AND THE RATE METHOD USING A DESIGN MATRIX FOR GROUP MEANS (THOMAS ET AL. 2006, 2009)
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Title Online Appendix 4
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Description SIMULATION EXPERIMENT TO INVESTIGATE WHETHER R-PACKAGES OUWIE AND MOTMOT PROVIDE COMPARABLE PARAMETER ESTIMATES AND LIKELIHOOD SCORES
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Title Online Appendix 5
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Description VARIATION IN EVOLUTIONARY RATES ESTIMATED BY DIFFERENT MODELS FIT TO DATA SIMULATED WHILE VARYING RELATIVE OPTIMA AND RELATIVE RATES PARAMETERS
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Title R-code
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Description R-code used for all tree and phenotypic data simulations, and for fitting different models to the simulated data. Please see the ReadMe file for details.
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Download README (1.4 Kb)
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When using this data, please cite the original publication:

Kaliontzopoulou A, Adams DC (2016) Phylogenies, the comparative method, and the conflation of tempo and mode. Systematic Biology 65 (1): 1-15. http://dx.doi.org/10.1093/sysbio/syv079

Additionally, please cite the Dryad data package:

Kaliontzopoulou A, Adams DC (2015) Data from: Phylogenies, the comparative method, and the conflation of tempo and mode. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.2ss46
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