Data from: Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms

Close RA, Johanson Z, Tyler JC, Harrington RC, Friedman M

Date Published: June 10, 2016

DOI: http://dx.doi.org/10.5061/dryad.304n7

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Supplementary Data File - Ctenoplectus Movie Rendering
Downloaded 30 times
Description Movie rendering of digitally-prepared specimen of NHMUK PV P. 63336, Ctenoplectus williamsi gen. et sp. nov.
Download Supplementary Data File 1 - Ctenoplectus.mov (10.84 Mb)
Details View File Details
Title Supplementary Data File - Ctenoplectus_P63336_laser_surface_scan
Downloaded 17 times
Description 3D surface model of NHMUK PV P. 63336 Ctenoplectus williamsi, gen. et sp. nov. specimen.
Download Supplementary Data File 2 - Ctenoplectus_...an.ply (106.0 Mb)
Details View File Details
Title Supplementary Data File - Genbank Accession Numbers
Downloaded 11 times
Description Genbank accession numbers for taxa not drawn from Santini et al.'s (2013) molecular phylogenetic analysis of Tetraodontiformes.
Download Supplementary Data File 4.xlsx (44.94 Kb)
Details View File Details
Title Supplementary Data File - PLY models of NHMUK PV P. 63336
Downloaded 16 times
Description 3D model of digitally-prepared skeleton of NHMUK PV P. 63336 Ctenoplectus williamsi, gen. et sp. nov., consisting of individual PLY files for separate skeletal regions.
Download Supplementary Data File 8 - PLY models of...36.zip (94.91 Mb)
Details View File Details
Title Supplementary Data File - Ctenoplectus_morphological_matrix
Downloaded 14 times
Description Morphological character matrix of Santini and Tyler (2003) including scoring of †Ctenoplectus williamsi gen. et sp. nov.
Download Supplementary Data File 3 - Ctenoplectus_...ix.nex (15.12 Kb)
Details View File Details
Title Supplementary Data File - Ctenoplectus BEAST XML
Downloaded 27 times
Description XML file for BEAST Total Evidence tip-dating analysis of Tetraodontiformes.
Download Supplementary Data File Ctenoplectus BEAST.xml (1.226 Mb)
Details View File Details
Title Supplementary Data File - Output of Four Replicates of BEAST SA FBD analysis of Tetraodontiformes
Downloaded 18 times
Description Output of four replicates of the BEAST Sampled Ancestor Fossilized Birth Death analysis of Tetraodontiformes, including Ctenoplectus williamsi gen. et sp. nov. Included are tree posteriors for molecular and morphological clocks, Tracer log files, and Maximum Sampled Ancestor Clade Credibility trees calculated from the combined four replicates.
Download Output of Four Replicates of BEAST SA FBD...es.zip (94.09 Mb)
Details View File Details
Title Supplementary Figure 1
Downloaded 19 times
Description Figure 1: Photographs of †Ctenoplectus williamsi (NHMUK PV P. 63336) in (a) dorsal, (b) anterior, (c) right-lateral, and (d) left-lateral views.
Download Dryad Figure 1.jpg (586.5 Kb)
Details View File Details
Title Supplementary Figure 2
Downloaded 11 times
Description Figure 2: Sagittal tomographic section through jaws of NHMUK PV P. 63336. (a) Sagittal tomographic section through jaws of NHMUK PV P. 63336, showing presence of walls posterointernal to tooth-bearing layers in upper and lower jaws. (b) Axial tomographic section. pmx, premaxilla; den, dentary; piw, posterointernal wall; tbl, tooth-bearing osteodentinic layer.
Download Dryad Figure 2.jpg (262.2 Kb)
Details View File Details
Title Supplementary Figure 3
Downloaded 36 times
Description Figure 3: Kernel probability-density estimates of divergence times for crown Tetraodontiformes and extant tetraodontiform families.
Download Dryad Figure 3.pdf (2.957 Mb)
Details View File Details
Title Supplementary Figure 4
Downloaded 22 times
Description Figure 4: Median among-branch morphological rate estimates for internal (red circles) and terminal (yellow triangles) branches on the Maximum Sampled-Ancestor Clade Credibility tree, using midpoint ages. Moving averages are represented by solid LOESS lines.
Download Dryad Figure 4.pdf (10.42 Kb)
Details View File Details
Title Table 1 - GenBank accession numbers
Downloaded 5 times
Description GenBank accession numbers for Zeus faber and Kentrocapros rosapinto sequences.
Download Table 1 - GenBank accession numbers.xlsx (44.96 Kb)
Details View File Details
Title Table 2 - PartitionFinder Scheme
Downloaded 9 times
Description Optimal partitioning scheme as determined by PartitionFinder.
Download Table 2 - PartitionFinder Scheme.xlsx (28.72 Kb)
Details View File Details
Title Table 3 - Tip Ages for Fossils
Downloaded 12 times
Description Table 3 - Tip-ages and justifications for fossil taxa.
Download Table 3 - Tip Ages for Fossils.xlsx (52.39 Kb)
Details View File Details
Title Table 4 - Monophyletic taxon sets
Downloaded 7 times
Description Table 4. Taxon sets for which monophyly was enforced in BEAST analysis.
Download Table 4 - Monophyletic taxon sets.xlsx (40.65 Kb)
Details View File Details
Title Table 5 Acanthomorph root-age
Downloaded 10 times
Description Table 5. Calculation of root-age prior for Acanthomorpha based on published divergence-dating studies.
Download Table 5 Acanthomorph root-age.xlsx (11.43 Kb)
Details View File Details
Title Table 6 Tetraodontiform crown prior age
Downloaded 8 times
Description Table 6. Calculation of node-age prior for crown Tetraodontiformes based on previous published divergence-dating studies.
Download Table 6 Tetraodontiform crown prior age.xlsx (13.50 Kb)
Details View File Details
Title Fused PLY model of Ctenoplectus williamsi NHMUK PV P63336
Downloaded 29 times
Description Fused PLY model of Ctenoplectus williamsi NHMUK PV P63336.
Download Fused PLY model of Ctenoplectus williamsi...36.ply (384.3 Mb)
Details View File Details

When using this data, please cite the original publication:

Close RA, Johanson Z, Tyler JC, Harrington RC, Friedman M (2016) Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms. Palaeontology 59(4): 499-514. http://dx.doi.org/10.1111/pala.12245

Additionally, please cite the Dryad data package:

Close RA, Johanson Z, Tyler JC, Harrington RC, Friedman M (2016) Data from: Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.304n7
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: