Data from: How to calculate the non­-synonymous to synonymous rate ratio of protein-coding genes under the Fisher­-Wright mutation­-selection framework

dos Reis M

Date Published: March 27, 2015

DOI: http://dx.doi.org/10.5061/dryad.3r3q4

 

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Title Accompanying data for the paper
Description This zip file contains sequence alignments (*.phyl) and phylogenetic trees (*.tree) for the PB2 and RBCL protein-coding genes analysed in the paper. It also contains estimates of fitness values at codon sites for the two proteins. The fitness estimates can be used to calculate the relative non-synonymous substitution rate as explained in the paper (e.g. Eq 3.1).
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When using this data, please cite the original publication:

dos Reis M (2015) How to calculate the non­-synonymous to synonymous rate ratio of protein-coding genes under the Fisher­-Wright mutation­-selection framework. Biology Letters 11(4): 20141031. http://dx.doi.org/10.1098/rsbl.2014.1031

Additionally, please cite the Dryad data package:

dos Reis M (2015) Data from: How to calculate the non­-synonymous to synonymous rate ratio of protein-coding genes under the Fisher­-Wright mutation­-selection framework. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.3r3q4
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