Data from: Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae

Hunsperger HM, Randhawa T, Cattolico RA

Date Published: March 4, 2015

DOI: http://dx.doi.org/10.5061/dryad.3ss6p

 

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Title AdditionalFile1_Alignment_NexusFormat
Downloaded 8 times
Description Nexus formatted alignment of all protein sequences used for POR phylogeny inference.
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Title AdditionalFile2_BayesianTree_NexusFormat4FigTree
Downloaded 7 times
Description Bayesian POR phylogeny in Nexus format, readable in the program FigTree.
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Title AdditionalFile3_MaximumLikelihoodTree_NewickFormat
Downloaded 2 times
Description Maximum-likelihood POR phylogeny in Newick format.
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Title AdditionalFile4_PorSpeciesTable
Downloaded 30 times
Description Excel spreadsheet of identifying information (e.g., accessions) for all sequences used in the POR phylogeny.
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Title AdditionalFile5_PrimerTable
Downloaded 33 times
Description Table of degenerate and species-specific primers used to amplify por gene sequences from stramenopile algae.
Download AdditionalFile5_PrimerTable.xlsx (12.66 Kb)
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When using this data, please cite the original publication:

Hunsperger HM, Randhawa T, Cattolico RA (2015) Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evolutionary Biology 15(16). http://dx.doi.org/10.1186/s12862-015-0286-4

Additionally, please cite the Dryad data package:

Hunsperger HM, Randhawa T, Cattolico RA (2015) Data from: Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.3ss6p
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