Data from: Wood-inhabiting insects can function as targeted vectors for decomposer fungi

Jacobsen RM, Kauserud H, Sverdrup-Thygeson A, Markussen Bjorbækmo M, Birkemoe T

Date Published: July 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.3t2d4

 

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Title Jacobsen_Pool1_forward_reads
Downloaded 6 times
Description Bzip-compressed fastq-file containing raw sequences (forward reads) from Illumina HiSeq of pooled fungal DNA extracted from 103 samples (Pool1) of wood-inhabiting insects.
Download NG-9365_Rannveig1_lib117480_4476_2_1.fastq.bz2 (1.382 Gb)
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Title Jacobsen_Pool1_backward_reads
Downloaded 5 times
Description Bzip-compressed fastq-file containing raw sequences (backward reads) from Illumina HiSeq of pooled fungal DNA extracted from 103 samples (Pool1) of wood-inhabiting insects.
Download NG-9365_Rannveig1_lib117480_4476_2_2.fastq.bz2 (1.383 Gb)
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Title Jacobsen_mapping_file_DNA
Downloaded 6 times
Description Excel-file with tag/mid (molecular identifier) sequences, ITS-sequences, sample IDs for tags/mids and lists of repetitions and negatives.
Download Jacobsen_mapping_file_DNA_Fungal_Ecology.xlsx (36.23 Kb)
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Title Jacobsen_OTU_table_Fungal_Ecology
Downloaded 7 times
Description OTU-table with taxonomic annotation for OTUs and information on insect samples.
Download Jacobsen_OTU_table_Fungal_Ecology.xlsx (653.2 Kb)
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Title Jacobsen_Pool2_forward_reads_part1
Downloaded 3 times
Description First half of the bzip-compressed fastq-file containing raw sequences (forward reads) from Illumina HiSeq of pooled fungal DNA extracted from 98 samples (Pool2) of wood-inhabiting insects. Split with HJSplit as recommended by Dryad (http://wiki.datadryad.org/Large_File_Transfer).
Download NG-9365_Rannveig2_lib117481_4476_2_1.fastq.bz2.001 (943.7 Mb)
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Title Jacobsen_Pool2_forward_reads_part2
Downloaded 2 times
Description Second half of the bzip-compressed fastq-file containing raw sequences (forward reads) from Illumina HiSeq of pooled fungal DNA extracted from 98 samples (Pool2) of wood-inhabiting insects. Split with HJSplit as recommended by Dryad (http://wiki.datadryad.org/Large_File_Transfer).
Download NG-9365_Rannveig2_lib117481_4476_2_1.fastq.bz2.002 (884.0 Mb)
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Title Jacobsen_Pool2_backward_reads_part1
Downloaded 3 times
Description First half of the bzip-compressed fastq-file containing raw sequences (backward reads) from Illumina HiSeq of pooled fungal DNA extracted from 98 samples (Pool2) of wood-inhabiting insects. Split with HJSplit as recommended by Dryad (http://wiki.datadryad.org/Large_File_Transfer).
Download NG-9365_Rannveig2_lib117481_4476_2_2.fastq.bz2.001 (943.7 Mb)
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Title Jacobsen_Pool2_backward_reads_part2
Downloaded 3 times
Description Second half of the bzip-compressed fastq-file containing raw sequences (backward reads) from Illumina HiSeq of pooled fungal DNA extracted from 98 samples (Pool2) of wood-inhabiting insects. Split with HJSplit as recommended by Dryad (http://wiki.datadryad.org/Large_File_Transfer).
Download NG-9365_Rannveig2_lib117481_4476_2_2.fastq.bz2.002 (887.3 Mb)
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Title Rep_seqs_OTUs_scata_10k
Downloaded 3 times
Description Representative sequences for OTUs as clustered by Scata (https://scata.mykopat.slu.se/) in subsampled dataset (max 10k sequences from each insect sample).
Download Rep_seqs_clusters_scata_10k.fas (2.022 Mb)
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When using this data, please cite the original publication:

Jacobsen RM, Kauserud H, Sverdrup-Thygeson A, Markussen Bjorbækmo M, Birkemoe T (2017) Wood-inhabiting insects can function as targeted vectors for decomposer fungi. Fungal Ecology 29: 76–84. http://dx.doi.org/10.1016/j.funeco.2017.06.006

Additionally, please cite the Dryad data package:

Jacobsen RM, Kauserud H, Sverdrup-Thygeson A, Markussen Bjorbækmo M, Birkemoe T (2017) Data from: Wood-inhabiting insects can function as targeted vectors for decomposer fungi. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.3t2d4
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